Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01776 ATGGAAACTGTATCACTCAATCCTCTCTTCATCTTCTTTCTTTTCTTCGGCCTTTTCTATTCCTCTGTTTCTATTAATCCTTCAGATTTAGCATTCAAGTCCACCTACAGCCGTCTCTGCAGCCACCTTGTCCCTGAACCGCCGGTGCATTCCGACGCCGGAAACGTCCCCGGCGTTTCCGACGATCTCCGGTTCCAATCCGGATATTTCTCCGGCGGCGATCGTATCTTTAACAGATCCGGCGCTTCGATGCACGCGTCGTTCCGCGTGACCTTGGTTCGCCGAAGCGGGAGCGACGGCGTTTTCGAATTGCGCGGGCAAATGCTTCTGCAGCAGCGTAGAGGAGCGACGCCGGCGCCGGGAAGGCTGCTCCGGCGAGTTTTTTCGTTCGGGAGAGTGACGCATTGGATGCGCGTTTCCCTGAGTGGATTTTGGTCTCAATTTTCCGGTAACCTTTGTATGTTCGGAACAGGATCTCATGCTAACCTGCGGAGTGCTAATGTTGTTCTTAAGCTTCGTTACCCTAGAGATTTGAGCCTTTTGAATTGTTTGATTCGTGGAACACTAGAAAGTTTTGATGACAATAATAGTTCGCAGTTCTTTGAGCCTATTTCGATATTGGCTTTGTCTCAGAGTTCGAAATACAAGTTTACAGTGGCTGGGAATGAAAGAGAGAAAGTTTGTGGAGGTGGAGGTGGATCAGATAGGGAGGGTTTGTCCCTTAGAAACTTAAACCGGGGTGCTTGCACTGCTTTTCTTGGACACACGAATAAGTTTGAATTGGAATATGGGAGTCAGTGTAGTAATGTTAGTTGCAATCCTGTCAGTGGTAATGGTGAAGAACTGCCTGGTTATATGTTTTTTCATGGCACTCTTTGTGCGGAGAGGGAGAAGGTTCAGATGCTGTTGGGTTTTTCTGATTCCGGCTACCGGGATGCTATCTTTCCGTTTCATCCGAATACAACTTTGGTTTCTGAGGGGAAGTGGGATGACAAGGAGAATCGGCTATGTGCGATTGCTTGCCGGATCTTGAACTTCACAGAATCTTGGCTTAGTCCTTATGTTGGAGATTGCAATATTAGGCTTACTTTAAGTTTTCCTGCAATTTTATCTTTGAGGAACAGGAGTACAGTTTTGGGGCAAATTTGGAGTGACAAAGCGGTTGATGAACCTGGCTACTTCAGTAAAGTTGGATTCCAGGGTTCATCGAGGGTATCAAAAGGTCTCCATGGTTTCCAATACAAGTATACTGAAACTGAGAAGGTGAGAAAATCTTGTGTGCAGATGATGAATGCTGGAGGGAAGGGAAATACATATCCGAGTGGATATTCATCTGATATGGCATTTAGCATGTTAGTGACGAACAGCAAAGGGCAAGTGGCTCAAGGTTACACATCACCACTATCTGTAAATGATCAAATTTATAATGGACAGTCGTATGGGGCTCCAATTGTGTTGACAACTGAAAATTCAAAAGCACATGGAGTTCAATCAGAAAATTACAATGATTTGTTGAATGTCAGCTATACGATGAGTTTTAAACCCCCTCCTGATTTCAAGTTTGGTAGAGGTGTCTTGTCAACCGAAGTCAAAATTGGTGCTGAAGGGATTTACAATAAGAATACTGGAGTTCTTTGTATGATAGGATGTAGGCGTTTGAGATCAACGGAAAAAGTACTGATAAAGAATGAGTCTCTGGACTGTGAAATCATGGTTAATGTTCAGTTTCCTCCTTTGAACACAAAAGGAGGTGAAGCTCTCAAAGGAACTATAGAAAGCACACGACAAAAGTCAGAGCCTTATTATTTTGATCCCCTTCAGTTGTCTTCATATTTCATTTACACAACCCAAGCAGATGCTTCCATTTTGAGAATGGATTTTGAGTTAATTATGGTGTTGGTATCAGACACACTTGCTTGTGTTTGTGTAGGATTGCAACTCCTCCACGTGAAAAAGCACCCAGATGTGCTTCCTTACATTTCTGTTGTGATGCTTGCTGTTATTACTCTAGGTCACATGATTCCCCTGATTTTGAATTTTGAAGCTTTATTCACGGGGAAACACAGCGTGCAGAATACTTTTCTGGGGAGTGGAGGCTGGCTTGAAGTGAATGAGGTATTTGTGAGGATAGTGACACTGGTAGCCTTTCTTCTAGAGTTGCGCCTCATACAATTGACCTGGTCCTCAAGACAGGTTGAGGGAAGCCGTCCAGGTCTCTGGGGTTCTGATAAAAAGGTCCTTTATATTATTCTACCATTGTACATTGGTGGTGGATTGACTGCTTGGTCGGTGCACATATGGAAGACTTCTTACCAGAAAAAATTTAGACCATTTCGGCTTTCGCGCCACAAGTTTAAGCTTCCTCGTGGGTTCGTATACCGACCTCCTTCCCTCTGGGAAGCCTTCAAATCTTACGCTGGTCTGCTCCTGGATGGTTTTCTGCTCCCACAGATTCTGTTTAACATAATGTTTAACTCAGAAGGGAAAGCTCTAGCCTCTTCCTTTTACGTTGGGACAACAATTGTTCGTACACTGCCCCATGTGTATGATCTTTTTAGAGCTCACATTTCTGCATGGTACCTTGATTTGTCATACATATATGCAAACCATAGAATGGATTTTTATTCCACAGCCTGGGACATTATAATCCCTAGTGGTGCTATTTTATTTGCTCTTCTCGTATACTTTCAGCAGAAATTTGGCAGTCGGTGCATTCTTCCAAAGAGGTTCAGAGAAAGTTCTGCCTATGAGAAAGTACCTGTTATTGGCAATGACGATTTATGA 2784 0.4375 METVSLNPLFIFFLFFGLFYSSVSINPSDLAFKSTYSRLCSHLVPEPPVHSDAGNVPGVSDDLRFQSGYFSGGDRIFNRSGASMHASFRVTLVRRSGSDGVFELRGQMLLQQRRGATPAPGRLLRRVFSFGRVTHWMRVSLSGFWSQFSGNLCMFGTGSHANLRSANVVLKLRYPRDLSLLNCLIRGTLESFDDNNSSQFFEPISILALSQSSKYKFTVAGNEREKVCGGGGGSDREGLSLRNLNRGACTAFLGHTNKFELEYGSQCSNVSCNPVSGNGEELPGYMFFHGTLCAEREKVQMLLGFSDSGYRDAIFPFHPNTTLVSEGKWDDKENRLCAIACRILNFTESWLSPYVGDCNIRLTLSFPAILSLRNRSTVLGQIWSDKAVDEPGYFSKVGFQGSSRVSKGLHGFQYKYTETEKVRKSCVQMMNAGGKGNTYPSGYSSDMAFSMLVTNSKGQVAQGYTSPLSVNDQIYNGQSYGAPIVLTTENSKAHGVQSENYNDLLNVSYTMSFKPPPDFKFGRGVLSTEVKIGAEGIYNKNTGVLCMIGCRRLRSTEKVLIKNESLDCEIMVNVQFPPLNTKGGEALKGTIESTRQKSEPYYFDPLQLSSYFIYTTQADASILRMDFELIMVLVSDTLACVCVGLQLLHVKKHPDVLPYISVVMLAVITLGHMIPLILNFEALFTGKHSVQNTFLGSGGWLEVNEVFVRIVTLVAFLLELRLIQLTWSSRQVEGSRPGLWGSDKKVLYIILPLYIGGGLTAWSVHIWKTSYQKKFRPFRLSRHKFKLPRGFVYRPPSLWEAFKSYAGLLLDGFLLPQILFNIMFNSEGKALASSFYVGTTIVRTLPHVYDLFRAHISAWYLDLSYIYANHRMDFYSTAWDIIIPSGAILFALLVYFQQKFGSRCILPKRFRESSAYEKVPVIGNDDL 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01776 927 Pfam Protein of unknown function (DUF2921) 38 906 IPR021319 -
Vian6g01776 927 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 10 922 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01776 Vian-Chr6 35264268 35267051 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01776 - - gmx:100812795 1509.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01776 6 35264268 35267051 Vian6g01776 6 35264268 35267051 ECH