Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01352 ATGAAGGGTCTCTTCAAGTCTAAACCTCGCACTCCTGCAGATGTAGTGCGTCACACCAGAGATCTTCTACTCTTCGTTGATCGGAACTTCGAATCCCGCGAAAGTAAAAGAGAAGAGAAGCAAATGTCCGAGCTATTTAAAAACGTCAGGGAGCTTAAGCAAATCCTGTATGGAAATAGTGATTCTGAACCAGTTGCGGAAGCTTGCGCACAGTTGACTCAGGAGTTCTTTAAGGAGGACACATTGCGTCTGTTTATCAAATGTCTTCCAAAATTGAATCTGGAGGCCAGAAAAGATGCCACTCAAGTTGTTGCAAATTTACAAAGGCAACAGGTTCAGTTTAAGTTGATTGCATCTGATTACCTGGAAAAAAATCTGGATCTTATGGATGTCTTGATAGTTGGCTATGAAAACACAGATATGGCTTTACACTATGGTGCAATGCTAAGGGAGTGTATTCGACATCAAATTGTCGCAAAATATGTTCTCAACTCACCACTTATGAAGAGATTCTTTGACTATATCCAACTCCCAAATTTTGACATTGCTGCGGATGCTGCAGCTACCTTTAAGGAGCTCTTGACAAGACATAAATCTACTGTAGCCGAATTCCTTTCCAAGAATTATGAATGGTTTTTTGCAGAATATAACACTAAGCTGTTGGAATCTTCCAATTACATTACAAGGCGCCAAGCTGTCAAGTTGTTGGGAGATATATTACTTGACCGTTCAAATTCAGCAGTAATGACACGATACGTGAGCTCAAGAGACAACTTGAGGATTTTAATGAATCTTCTAAGAGAGTCAAGCAAGAGCATACAAATTGAAGCATTTCATGTTTTCAAGTTATTTGCTGCTAACCAACATAAACCAGCTGATATCGTTAGTATATTTGTCGCAAACAAAAGTAAGATGCTGAGACTATTGGAAGACTTCAAAATTGATAAAGAGGATGAACAATTTGAAGCTGACAAAGCTCAAGTGATGAAGGAAATCGAAGCTCTTTAA 1008 0.3899 MKGLFKSKPRTPADVVRHTRDLLLFVDRNFESRESKREEKQMSELFKNVRELKQILYGNSDSEPVAEACAQLTQEFFKEDTLRLFIKCLPKLNLEARKDATQVVANLQRQQVQFKLIASDYLEKNLDLMDVLIVGYENTDMALHYGAMLRECIRHQIVAKYVLNSPLMKRFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYEWFFAEYNTKLLESSNYITRRQAVKLLGDILLDRSNSAVMTRYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQHKPADIVSIFVANKSKMLRLLEDFKIDKEDEQFEADKAQVMKEIEAL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01352 335 SUPERFAMILY ARM repeat 10 335 IPR016024 -
Vian6g01352 335 Gene3D - 3 335 IPR011989 -
Vian6g01352 335 PANTHER CALCIUM-BINDING PROTEIN 39-RELATED 1 334 IPR013878 -
Vian6g01352 335 Pfam Mo25-like 4 335 IPR013878 -
Vian6g01352 335 Coils Coil 35 55 - -
Vian6g01352 335 FunFam putative MO25-like protein At5g47540 3 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01352 Vian-Chr6 31074090 31078109 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01352 K08272 - gmx:100817060 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01352 6 31074090 31078109 Vian6g01352 6 31074090 31078109 ECH