Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01296 ATGCATGCAGAAACCTTTTGCAAGCGTATAATGAGTTTCAGAGTGAGAGATCAAGAAAAAGAATCCGATTCTCCAAGAGAGGTTGGAGAGATTGACACAAGGGCTCCATTTCAATCTGTTAGAGCAGCAGTTAGTTTATTTGGTGAAGTAGCCGTGTCAAGGGACAAACGTTCTTTCAAGAGAAGATCGTCAGAGAATGTGCTGGAAAAGGAGACTCAGCTTCTCTTGGCCCAGAGAGAATTAACCACAATAAAGAAAAAGCTGGATAGTTCTGAGATCACAAAAGGAAAAGCACTTTCCGAGCTTGATAAGGCCAATTTAACACTTCAGGAATTGGAAAAGAAGCTCAACACTATAGGATATGAAGCATGGAAACAAGAACTAGAGCATGCAAGAAAAGAGTACACAACAACAGTAAAGGAACTAGATGCCTCCAAGCAAGAACTCAATAAAATCAGGCAGGATTTTGACACAGCTTTGGAGGCAAAACTGGCTGCATTCCAAACAGCGGGAGAGGCTCAGCGTTCTGCAAAATTGAACTCAGAAAAGCTCCAAGAACTCTCAAACCAAATTGCAACCATGAAAGAACAAATTCAACATTTGAAGGTTGCCTCATCACAAGCCCAAGATGGTCAGGTAAAGGCCATGGAAGAAAGAGAAGCACGAGTAAGTTTCTACAAAAATGCCAAGGAAGAAGCACAGAATAAATTGATGGCTTTGAAGAACGAATGTGACCAGGAACTAACACAGGGTCTAGAGGCCAAACTTCATGAAACAAGTAGAGAGATTCAGGTTCTCCAAGAACAGGTGAAACAGGCACATGCTTCAGAGATGGATACAGTGAGAGTTATAACTTTGGAGATCGAAGAAGCCAAAAAAACACTTCAGGAAGTTCTAGAAGAGGAAACCTCCCTGAGAAACCTAGTGGATTTAATTAGGACAGAGTTAGAACAAGTCAAGAAAGAGCAAGAGGATCTCAAGGAGAAGGAAAAGGCAGCAGAAGCCCATGCTGCTACCCTAACTGATAAACTACGGAATGGATCAGAAGAGACAAGTTCTGCCGTGGAAAAAGAATCTGAAAACTGTGCTAAAGTAGAATTGAGGATCAAACAGCTTTCATTTGAGACAGAAGTTGCAAGAAAGGAAGAAGAAGAAATAAGAAGCAAAACTCAAGAGCTGAAGCATGAGGCTGAAAAATCCAAAGCTGTGGCAAAAGAATTGGAGAAGAAACTTGAGCTTTATATGAAACAGGCTGAGGAAGCCAGAGAAGCAGAACGAAAAGCCATTGTGGCGATGAAGATGATGTCTGAAAGTGTCGACAGTCAAGACACGGCCTCAGTTTTAGATGCTAATGGAAAGATTGTGTTGACAGTTGATGAGTTTGCAGCATTGAGTGGGAAAATCAAGGAATCTGAAGACTTGATTGACAGAACGGAAACAGCATCCATGGCTCAGGTGGAAGCAATCAACTTAAGAAAGAATGAAGTGAACAAAAAGGTGGAGGCAAACCTGAAAGCAATTGAGGAAATAAAAGCTGCGACAGACATGGCTCTGAAGAATGCAGAGATGGCAGATTCTGCTAAGGTTGTAGTTGAGAACGAACTAAAGAAGTGGCGTCTAGAAGAACAAAACTTTGAAGGCACAGAAAATTCTCCAAGATCAATCTCTCTGCGTATTTAA 1680 0.4149 MHAETFCKRIMSFRVRDQEKESDSPREVGEIDTRAPFQSVRAAVSLFGEVAVSRDKRSFKRRSSENVLEKETQLLLAQRELTTIKKKLDSSEITKGKALSELDKANLTLQELEKKLNTIGYEAWKQELEHARKEYTTTVKELDASKQELNKIRQDFDTALEAKLAAFQTAGEAQRSAKLNSEKLQELSNQIATMKEQIQHLKVASSQAQDGQVKAMEEREARVSFYKNAKEEAQNKLMALKNECDQELTQGLEAKLHETSREIQVLQEQVKQAHASEMDTVRVITLEIEEAKKTLQEVLEEETSLRNLVDLIRTELEQVKKEQEDLKEKEKAAEAHAATLTDKLRNGSEETSSAVEKESENCAKVELRIKQLSFETEVARKEEEEIRSKTQELKHEAEKSKAVAKELEKKLELYMKQAEEAREAERKAIVAMKMMSESVDSQDTASVLDANGKIVLTVDEFAALSGKIKESEDLIDRTETASMAQVEAINLRKNEVNKKVEANLKAIEEIKAATDMALKNAEMADSAKVVVENELKKWRLEEQNFEGTENSPRSISLRI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01296 559 Coils Coil 177 204 - -
Vian6g01296 559 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 29 544 - -
Vian6g01296 559 Coils Coil 95 162 - -
Vian6g01296 559 Coils Coil 355 375 - -
Vian6g01296 559 Pfam Weak chloroplast movement under blue light 30 119 IPR008545 -
Vian6g01296 559 Pfam Weak chloroplast movement under blue light 105 543 IPR008545 -
Vian6g01296 559 Coils Coil 379 427 - -
Vian6g01296 559 MobiDBLite consensus disorder prediction 327 360 - -
Vian6g01296 559 Coils Coil 216 276 - -
Vian6g01296 559 Coils Coil 281 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01296 Vian-Chr6 30583656 30585598 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01296 - - gmx:100818297 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01296 6 30583656 30585598 Vian6g01296 6 30583656 30585598 ECH