Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01295 ATGGGCCGTGTTGTTTCTGAGGATGCCCTCAAGAAGCTGCAAGCTCTCATGGATCAAGTTGAGGAGGAGCCACTGCTGAGAACTTTTCAGAATGTTCATCAAGGATGTGTTACGGAAACCTTAATTCGATTTCTAAAGGCTAGGGAGTGGAACGTTTCCAAGGCACATAAAATGATAATCGAATGTCTAAATTGGAGAGTGCAAAATGAAATTGACAACATATTATCGAAGCCCATAATTCCTACTGATTTATACCGAGGCATTCGTGATTCACAACTTATAGGTTTGTCAGGTTACTCAAGAGAGGGTCTTCCTGTCTTTGCAATTGGTGTTGGGCTTAGCACATTTGACAAAGCATCTGTTCATTATTATGTGCAGTCTCATATTCAAATTAACGAATATCGTGATCGTGTAATATTGCCTTCTGCATCAAAGAAGCATGGACAGCCTATTACCACATGCATAAAAGTTTTGGATATGACTGGTCTGAAGTTGTCAGCCCTAAATCAGATCAAGTTGTTAACAATAATATCATCCATTGATGATCTGAACTACCCTGAGAAAACAAATACTTATTACATTGTAAATGTCCCATACATATTTTCAGCCTGTTGGAAGGTTGTGAAGCCACTTCTGCAAGAGAGAACAAGAAGAAAAGTGCAAGTCTTGCCGGGTTGTGGGCGAGATGAACTGTTGAAGATCATGGATTTTGCATCTCTGCCACATTTCTGTAAAAGAGAAGGCTCTGGATCATCGAAACATTCAGATAATGGAAGTGGAAATGAAAGTTGCTATTCCTTGGATCATCCTTTCCATCAGAAGCTCTACAATCACATAAAGGAGCAATCCAGAATCCATGAAGCTGTTGAACCAATCAAGCAGGGATCGTTCCATGTAGATTTTCCTGAACCTCCTGCTGAGAAAGCTGAGATTGTCAAGACTTTAGAGTCTGAGTTACACAAGTTTAAGATCAGCAATGGGAGTTGTGATTGA 993 0.4008 MGRVVSEDALKKLQALMDQVEEEPLLRTFQNVHQGCVTETLIRFLKAREWNVSKAHKMIIECLNWRVQNEIDNILSKPIIPTDLYRGIRDSQLIGLSGYSREGLPVFAIGVGLSTFDKASVHYYVQSHIQINEYRDRVILPSASKKHGQPITTCIKVLDMTGLKLSALNQIKLLTIISSIDDLNYPEKTNTYYIVNVPYIFSACWKVVKPLLQERTRRKVQVLPGCGRDELLKIMDFASLPHFCKREGSGSSKHSDNGSGNESCYSLDHPFHQKLYNHIKEQSRIHEAVEPIKQGSFHVDFPEPPAEKAEIVKTLESELHKFKISNGSCD 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01295 330 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN 2 328 - -
Vian6g01295 330 CDD SEC14 85 243 IPR001251 -
Vian6g01295 330 Coils Coil 3 23 - -
Vian6g01295 330 SMART sec14_4 88 249 IPR001251 -
Vian6g01295 330 Gene3D - 4 294 IPR036865 -
Vian6g01295 330 Pfam CRAL/TRIO, N-terminal domain 9 60 IPR011074 -
Vian6g01295 330 SUPERFAMILY CRAL/TRIO domain 83 278 IPR036865 -
Vian6g01295 330 Pfam CRAL/TRIO domain 92 243 IPR001251 -
Vian6g01295 330 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 241 IPR001251 -
Vian6g01295 330 SMART CRAL_TRIO_N_2 37 62 IPR011074 -
Vian6g01295 330 SUPERFAMILY CRAL/TRIO N-terminal domain 6 75 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01295 Vian-Chr6 30578827 30582146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01295 1 327 Acyl Lipid Metabolism Gene Families AT5G47730 73.089 9.01e-178 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01295 K26544 - gmx:100793867 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01295 6 30578827 30582146 Vian6g01295 6 30578827 30582146 ECH