Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01291 ATGGCGGATCTCAAGTCCACATTCTCAAACGTCTATTACGTTCTCAAAGACGAACTCCTCCACGACCCCGCTTTTGAATTCTCCGATGACGCTCGCCAATGGGTCGACCGGATGCTGGACTACAATGTGCCAGGAGGAAAGTTGAACCGGGGACTCTCAGTCATTGACAGCTACAAACTGTTGAAAGAAGGACAGACATTAAATGATGACGAAATTTTCCTTGCTAGTGCTCTTGGTTGGTGTATTGAATGGCTTCAGGCGTATTTTCTTGTCCTTGATGACATTATGGATAATTCGCACACACGTAGGGGTCAACCATGCTGGTTTAGAGTGCCCGAGGTTGGGATGATTGCAGCAAATGATGGAGTTTTACTAAGAAACCATATTCCACGCATTCTTAAGAACCATTTTAGGGGAAAGCCATATTACGTAGATCTTCTTGATTTGTTTAATGAGGTTGAGTTCCAGACTGCTTCAGGACAGATGATAGATCTGATTACCACACTGCAAGGAGGAAAAGACCTCTCCAAATACACATTAACTCTGCATCGGCGTATTGTTCAGTACAAGACTGCTTATTATTCGTTTTACCTCCCAGTTGCATGTGCATTGCTCATGGCGGGTGAGAATCTGGAAAACCATGTTGATGTGAAGAACATTCTTGTTGAGATGGGAACCTACTTTCAAGTACAGGATGATTATTTGGATTGCTTTGGGGATCCTGATACTATTGGAAAGATAGGTACAGATATTGAAGATTTTAAATGCTCTTGGTTAGTTGCAAAAGCTTTGGAGCTTAGCAATGAGCAACAAAAGAAAGTTCTATACGTAATAAAGGCCCTGTATAATGAGCTTAATCTTAAGGGTGCATTTGAGGAGTATGAGAGCAAGAGCTATGAGAAGCTTGTAACTTCCATTGAAGCTCATCCTAGCAAAGCAGTTCAAGCTGTATTGAAGTCCTTTTTGGCTAAGATTTACAAGAGGCAGAAGTAG 993 0.4199 MADLKSTFSNVYYVLKDELLHDPAFEFSDDARQWVDRMLDYNVPGGKLNRGLSVIDSYKLLKEGQTLNDDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPEVGMIAANDGVLLRNHIPRILKNHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLQGGKDLSKYTLTLHRRIVQYKTAYYSFYLPVACALLMAGENLENHVDVKNILVEMGTYFQVQDDYLDCFGDPDTIGKIGTDIEDFKCSWLVAKALELSNEQQKKVLYVIKALYNELNLKGAFEEYESKSYEKLVTSIEAHPSKAVQAVLKSFLAKIYKRQK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01291 330 CDD Trans_IPPS_HT 30 328 IPR000092 GO:0008299
Vian6g01291 330 Pfam Polyprenyl synthetase 33 276 IPR000092 GO:0008299
Vian6g01291 330 SUPERFAMILY Terpenoid synthases 8 329 IPR008949 -
Vian6g01291 330 FunFam Farnesyl pyrophosphate synthase 1 329 - -
Vian6g01291 330 SFLD Isoprenoid Synthase Type I 22 328 - -
Vian6g01291 330 ProSitePatterns Polyprenyl synthases signature 2. 224 236 IPR033749 -
Vian6g01291 330 Gene3D Farnesyl Diphosphate Synthase 2 329 IPR008949 -
Vian6g01291 330 PANTHER FARNESYL-PYROPHOSPHATE SYNTHETASE 2 330 IPR039702 GO:0008299|GO:0016765
Vian6g01291 330 ProSitePatterns Polyprenyl synthases signature 1. 90 104 IPR033749 -
Vian6g01291 330 SFLD Polyprenyl Transferase Like 22 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01291 Vian-Chr6 30533214 30536740 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01291 K00787 - gmx:100802347 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01291 6 30533214 30536740 Vian6g01291 6 30533214 30536740 ECH