Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01283 ATGTTCTATAGTCTTCACGATGCAGCTGAGTTCCATGCAGCTGCTAGAGCAGTTGGAGGATGTGGAGTATATGTAAGTGACAAACCTGGCCAACATGATTTCAATGTATTGAAAAAGCTTGTACTTCCTGATGGATCGGTTCTCAGAGCCAGATATCCTGGGAGACCATCTCGTGATTGCTTATTTGTTGATCCAGTTATGGATAAGAAGAGCCTTCTCAAGATTTGGAACTTGAACAAATGTGGGGGAGTCATAGCCATCTTTAATTGCCAAGGAACAGGTTCTTGGCCAGGTCTTGAAAGTAAGACTGAGGAGGAAGACATTATTTTTGAGCTATCTGGCAAGGTATCTCCCTCAGACATTGAGTATTTTGAAGAGGTGTCAGGAGGTCCATGGACTCAAGATTGTGCAGTTTTTCGCTTCAACACAGGATCTCTGACACGACTATCAAAGAAAGAATCATTTGATGTCACATTAAAAGTATTGCAGTGTGAAGTATTCACAGTATCTCCTATAAAGGTTTATAATCAAACAATCCAGTTTGCACCAATAGGACTAACAAACATGTACAACTCTGGTGGAGCTGTTGAAGCAGTTGAATTCAGTGATTCTTCTGAATCAAAAATACACATAAGGGGTAGAGGAGAAGGTGAATTTGGAGCTTACTCCAACCTAAGACCAAAGTCTTGCAGTGTAAATTCTGAAGATTTGGAGTTCAAATTTAGAGAGGAAGATAAACTTTTTGCAGTAACAATTCCAGCAAAAAACACTTCATGGGACATCACCATCTGCTACTGA 798 0.4023 MFYSLHDAAEFHAAARAVGGCGVYVSDKPGQHDFNVLKKLVLPDGSVLRARYPGRPSRDCLFVDPVMDKKSLLKIWNLNKCGGVIAIFNCQGTGSWPGLESKTEEEDIIFELSGKVSPSDIEYFEEVSGGPWTQDCAVFRFNTGSLTRLSKKESFDVTLKVLQCEVFTVSPIKVYNQTIQFAPIGLTNMYNSGGAVEAVEFSDSSESKIHIRGRGEGEFGAYSNLRPKSCSVNSEDLEFKFREEDKLFAVTIPAKNTSWDITICY 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01283 265 PANTHER - 1 256 IPR008811 -
Vian6g01283 265 Pfam Raffinose synthase or seed imbibition protein Sip1 1 249 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01283 Vian-Chr6 30446070 30447590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01283 1 263 Glycoside Hydrolase AT1G55740 48.352 5.41e-80 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01283 - - gmx:100819413 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01283 6 30446070 30447590 Vian6g01283 6 30446070 30447590 ECH