Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01137 ATGGCTCGGAAGGGTAATCAGCAGAAGAATGGAGTGGACCGTCAGGGATTGAATCACAAAAAGGGGGTTTCTGATAGTGTGCTTCCGGGAATGAAGGGCCATGTTAAAGGAGGGCCGGTGAAGGTTTTCCCGAGAGAGGACCTCACTGACGGTGATAGCGGTGTTGCGCGGACTGCATGTGATGCCAGTTCTTCAGGTGATGACTTTAACAATGAACATAAGTCTGAAAATATTTCTCTGAAAGAGAAACAAGGGATGGCTGGAAAGCATGACCTGGAGGAGTCCTTGCCCTTTGAGAGAGATTCGAGGGATGACAGTTTGAATTCCGAAGGTTCAGTACAAGAAGAAAATGGGTCTTTACCTAGAAGTGATCAAGGTCTTCAGAGTATAAATAGTAGATTGAGCTGTATACTGGATAGTTTGCACCTGAAAAGTGTGGTGGATAAAGTAGACCTTGCCGATAATGTGATAATTAGAAGATTAAGGTTTTCACTGTTTTCCATGTTCACAGCAATTTCAGAGTGGCTAACCAGGCAGACTCCATTGTTTGTATCTCTTAGAACCATCATGTTTAAAGCCTATCATGATTTCAGAACGAAAGTTGTGCAGGCATATCCTGTTATTCTGAAGTGGCTCATGCATTTTGGAAATGTAGTGCTCCTATTATCAGTATTTTGGTTGGATTGTGCACTTCGGGGTATTGATTCATTTGTACGAATGGGTACAACGTCCTTCTTCTCTGTTATATGGTGTAGCATATTTTCTGTGATTAGTATGATAGGGGTGCTCAAGTTTCTTGCTGTCGTGGGCCTGGCTGCTTTGATTGGATTTTTTCTTGGGCTTATGCTTGCAATTTTGATTGTTGCAATCATTGGAGTTGTTATCTTGTGGTTTTATGGTAGCTTTTGGACAACGGCATTTTTCATCATCCTAGGAGGATTGGCATTTATGTTTAGTCATGAACGGGTGGCACTACTTATCACCACAGTGTATTCTGTCTATTGTGCACGGCTGTATGTTGGGTGGCTTGGTTTGCTGGTGGCTTTTAATTTAGCTTTTATCTCTAGTGATGTTCTGATATACTTCCTCAAGAAAAACATAGATCAACAGAGTAGATCCAATCCTTTTGAGCAAAGAACTGGAACGTATGGTCAACCTGGATTCAGTGACGGATCAACACATGCTTCTTCCTCTGAAAATGGACCTGGACCATCAGCAGATCGCAGTGCTGGGATCCCTTCAACTAGTGGGGTTGATTCTGATGTAACTTCTGAAGATGAAGTAGTCCGTTTGTTGAACTGCTCTGATCACTATGCAGCACTGGGCTTGATGCGATATGAAAATATAGATGTTTCAATACTAAAGCGGGAATATAGGAAAAAGGCAATGTTGGTACATCCTGACAAAAATATGGGTAATGAAAAGGCTGCTGAAGCATTTAAGAAACTTCAAAATGCTTATGAGATTCTAATGGATTCCTTGAAGCGAAAAGCTTATGATGATGAGCTAAGGAGAGAGGAGCTATTGAGTGTCTTTCGTAGATTTCATGACGCATCTGATAAGAATGGTAGGCATGGATTCTTTCCTTCAGGATTTGCACGGTCTGATGCAGATGGCAAGGACCCATTTGGTGATTCAAGGCGAATAGCCTGCAAAAGGTGTGGTGGTTTTCATGTCTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGCCAAGATTTTCATCAAGCTAAGGATGGGGATGGATGGGTTGAACAATCTTCCCAACCATTTCTTTTTGGTTTATTGCAGAAGGTGGATGCTCCTTCAGCGTATGTGTGTGCTGGTAGCAGGATATACGATGCCACCGAATGGTATATCTGTCAGGGCATGAGATGTCCAGCGAACACTCATAAGCCAAGTTTCCATGTTAACACCAGTTTAATGTCCAAGAATAATTCTGGTAAAGGAACTAGTTCAGGTCAAAGAGGTGGGCGGATGCCAGCACCTAATATCGAAGAAACCATGACTGAGGAAGAATTCTTTGAATGGTTACAAAATGCAGTCCAGGCAGGTGCGTTTGACAATTTTAGTGGCACTGCAACAGAGAGCCCATCACCCAAATCTGGAAATGGGATGAAAAGTCCTAGTAGTAGTGGTGGTGGTGCTAGTGCTAGTGGCAGTAGCAGCAAGAGAAAGAAAAAGGGAAAAAAGCAATGGTGA 2217 0.4276 MARKGNQQKNGVDRQGLNHKKGVSDSVLPGMKGHVKGGPVKVFPREDLTDGDSGVARTACDASSSGDDFNNEHKSENISLKEKQGMAGKHDLEESLPFERDSRDDSLNSEGSVQEENGSLPRSDQGLQSINSRLSCILDSLHLKSVVDKVDLADNVIIRRLRFSLFSMFTAISEWLTRQTPLFVSLRTIMFKAYHDFRTKVVQAYPVILKWLMHFGNVVLLLSVFWLDCALRGIDSFVRMGTTSFFSVIWCSIFSVISMIGVLKFLAVVGLAALIGFFLGLMLAILIVAIIGVVILWFYGSFWTTAFFIILGGLAFMFSHERVALLITTVYSVYCARLYVGWLGLLVAFNLAFISSDVLIYFLKKNIDQQSRSNPFEQRTGTYGQPGFSDGSTHASSSENGPGPSADRSAGIPSTSGVDSDVTSEDEVVRLLNCSDHYAALGLMRYENIDVSILKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREELLSVFRRFHDASDKNGRHGFFPSGFARSDADGKDPFGDSRRIACKRCGGFHVWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDAPSAYVCAGSRIYDATEWYICQGMRCPANTHKPSFHVNTSLMSKNNSGKGTSSGQRGGRMPAPNIEETMTEEEFFEWLQNAVQAGAFDNFSGTATESPSPKSGNGMKSPSSSGGGASASGSSSKRKKKGKKQW 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01137 738 CDD DnaJ 436 492 IPR001623 -
Vian6g01137 738 ProSitePatterns Nt-dnaJ domain signature. 480 499 IPR018253 -
Vian6g01137 738 SUPERFAMILY Chaperone J-domain 431 519 IPR036869 -
Vian6g01137 738 MobiDBLite consensus disorder prediction 1 125 - -
Vian6g01137 738 Pfam Cleavage inducing molecular chaperone 546 643 IPR032843 -
Vian6g01137 738 PANTHER OS03G0832900 PROTEIN 1 738 - -
Vian6g01137 738 SMART dnaj_3 435 495 IPR001623 -
Vian6g01137 738 MobiDBLite consensus disorder prediction 693 738 - -
Vian6g01137 738 MobiDBLite consensus disorder prediction 642 663 - -
Vian6g01137 738 MobiDBLite consensus disorder prediction 642 668 - -
Vian6g01137 738 PRINTS DnaJ domain signature 475 495 IPR001623 -
Vian6g01137 738 PRINTS DnaJ domain signature 458 473 IPR001623 -
Vian6g01137 738 ProSiteProfiles dnaJ domain profile. 436 503 IPR001623 -
Vian6g01137 738 MobiDBLite consensus disorder prediction 373 421 - -
Vian6g01137 738 MobiDBLite consensus disorder prediction 111 125 - -
Vian6g01137 738 Gene3D DnaJ domain 424 514 IPR036869 -
Vian6g01137 738 Pfam DnaJ domain 436 500 IPR001623 -
Vian6g01137 738 MobiDBLite consensus disorder prediction 693 727 - -
Vian6g01137 738 MobiDBLite consensus disorder prediction 67 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01137 Vian-Chr6 28885776 28890375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01137 1 703 Miscellaneous Gene Families AT5G49580 52.817 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01137 K09534 - gmx:100789594 1199.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01137 6 28885776 28890375 Vian6g01137 6 28885776 28890375 ECH