Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01136 ATGACGACAACCAACTGCGTTAGCTTCAATTTCAACCACAACCCATGCCTCATATTCGCAAATAGCTATCCTACTTCTTCGTCTTTGCTTCCATTTTCTATTCACAATAAGCCCAGAAAATCAGCATCTCTGATTGTGAGTGCCCGCAAGAAAGACAAAAAAGACGATACCCATAGCTCCGTACCCCAACCTGACGAGGCCACGGGTTTCTTCCCTGAAGCTGTCTTATTTAAAAAGAGATCAGTTGAGGAAGAAGGGAAGCTGCTCCCGGAGTTTGAAGATGCCGAGGAAAGAGAACTCTTCGAAACGCTGATGCTTGAGCTGGAAAGTGATATGAATGGTGAAATATTACGCCACTATGAGGTCATGTACTTAATCCATGAGAAGCATGAAGATGAGGTTGCAGCTGTCAACGAGAAAATTCAAGACTTCATGAGGGAGAAGAAAGGTCAGATTTGGAGGTTGAATGATTGGGGTATGAGAAGGTTAGCTTACAAAATAAAGAAAGCTAATAAAGCCCACTACATGTTGATGAACTTCGAGTTGGATGCAAAATATATCAACGACTTGAAGACTTTGTTGGACCAAGATGAAAGAGTTATTCGGCATCTTGTGATAAAGAGGGACGAGGCAATCACTGAAGATTGCCCTCCTCCTCCGGAGTTTCACACTCTGCGGGCAAATGCAGATGATAACGACGATGAAGAATTTGATGAAGAGTATGATGAAGACTGGGATGGTGAAGATGAGCTTGATGATGATGATGATATTATATACGTAGATGTGCTCATTCTTGTTTCTTCTTCTTCTTCTAAATCATTCCTTAACTCAAATGCATGTATGTTTATTTATCTTAATTTTAATTTTTAA 870 0.4057 MTTTNCVSFNFNHNPCLIFANSYPTSSSLLPFSIHNKPRKSASLIVSARKKDKKDDTHSSVPQPDEATGFFPEAVLFKKRSVEEEGKLLPEFEDAEERELFETLMLELESDMNGEILRHYEVMYLIHEKHEDEVAAVNEKIQDFMREKKGQIWRLNDWGMRRLAYKIKKANKAHYMLMNFELDAKYINDLKTLLDQDERVIRHLVIKRDEAITEDCPPPPEFHTLRANADDNDDEEFDEEYDEDWDGEDELDDDDDIIYVDVLILVSSSSSKSFLNSNACMFIYLNFNF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01136 289 Gene3D - 90 215 IPR014717 -
Vian6g01136 289 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 116 228 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vian6g01136 289 MobiDBLite consensus disorder prediction 45 61 - -
Vian6g01136 289 FunFam 30S ribosomal protein S6 117 211 - -
Vian6g01136 289 Hamap 30S ribosomal protein S6 [rpsF]. 117 210 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vian6g01136 289 ProSitePatterns Ribosomal protein S6 signature. 159 168 IPR020815 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vian6g01136 289 MobiDBLite consensus disorder prediction 231 249 - -
Vian6g01136 289 Coils Coil 127 147 - -
Vian6g01136 289 NCBIfam 30S ribosomal protein S6 118 209 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vian6g01136 289 SUPERFAMILY Ribosomal protein S6 117 217 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vian6g01136 289 MobiDBLite consensus disorder prediction 217 249 - -
Vian6g01136 289 CDD bS6 119 208 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Vian6g01136 289 MobiDBLite consensus disorder prediction 45 67 - -
Vian6g01136 289 Pfam Ribosomal protein S6 119 207 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01136 - - gmx:100790128 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01136 6 28880367 28884458 Vian6g01136 6 28880367 28884458 ECH