Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01116 ATGGAGGGTGGAGAGGAGGGAGTGGAGATGGTGGTGGACTCGAAGGACTTACAGCAACAGAGTAAAGCCTTGGACAAGCTCACTGACCGTGTCGAGGATCGCCAATTGGACTCTACTCGCGTCCAGGAGGCAATGGCTTCCATCGCTGCTTCTGCTGAAGCTGATCGCAATGCCATGCGCATCAGGGAGAAAGAATTAGCTGCTGTTAAGATAAATGCAGCGGATGTTGATATAATTGCTAATGAGCTAGAGTTGGACAAAAAGGTTGCGGAAAGAACTTTGCGCGAGCACAAAGGTGATGCAGTTGCTGCCATTCGGCACTTGCTTCACTAG 333 0.5045 MEGGEEGVEMVVDSKDLQQQSKALDKLTDRVEDRQLDSTRVQEAMASIAASAEADRNAMRIREKELAAVKINAADVDIIANELELDKKVAERTLREHKGDAVAAIRHLLH 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01116 110 Coils Coil 80 100 - -
Vian6g01116 110 CDD UBA_HYPK 69 109 IPR038922 -
Vian6g01116 110 Gene3D - 70 108 - -
Vian6g01116 110 PANTHER HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER 5 110 - -
Vian6g01116 110 Coils Coil 17 37 - -
Vian6g01116 110 Pfam HYPK UBA domain 69 109 IPR044034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01116 Vian-Chr6 28684785 28692661 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01116 - - gmx:100527445 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01116 6 28684785 28692661 Vian6g01116 6 28684785 28692661 ECH