Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01018 ATGACATTGCTCTTTCCTTGTTTTGGTGGATATATGGCTAATCATTCTTTAGTTTTAGACAATACATCTGTTAGTACTGTTACTGTAGCAGAGCAGCCATTAGTCATTGGGCAAGAGTTTCCAGATGTGGAAACCTGCCGAAGAACACTGAAAGATATTGCCATTGCTATGCATTTTGATCTTCGGATAGTTAAGTCTGATCGCAGTCGTTTTATAGCAAAATGCTCCAAAGAAGGGTGCCCATGGCGGGTCCACGTTGCAAAGTGTCCTGGTGTTCCAACTTTTACTGTAAGAACACTACAAGGAGAACATACTTGTGAGGGGGTTCAGAACCTTCATCATCAGCAGGCATCAGTAGGTTGGGTTGCAAGATCTGTTGAAGCACGCATTCGAGATAATCCACAATACAAACCCAGGGAAATACTGCAAGATATTCGTGATCAGCATGGAGTTGCTGTTTCTTACATGCAAGCTTGGCGGGGGAAGGAACGTAGCATGGCTGCTCTTCATGGGACATTTGAAGAGGGTTACCGTCTTCTCCCTGCTTACTGTGAACAAATAAGGAAAACCAACCCTGGTAGCATTGCATCTGTTGTTGCTACTGGACAAGAAAATTGTTTTCAAAGACTGTTTATTTCTTATCGTGCATCAATTTATGGGTTTATAAATGCTTGTAGGCCACTTGTAGAACTTGACCGAGCACATCTTAAAGGAAAGTACCTAGGTACACTGCTTTGTGCTGCAGCTGTTGATGCAGATGATGCGCTGTTTCCTTTGGCAATTGCTGTTGTTGATACTGAAGGTGACGATAATTGGATGTGGTTCATGTCAGAATTGCGCAAACTTCTAGGAGTGAACACAGAAAATATGCCTAGGCTGACAATACTATCTGAAAGGCAAAGAGGCTTGGTGGAGGCAGTAGAAACACATTTTCCTACTGCTTCACACGGTTTCTGTCTGCGTTTTGTGAGTGAAAATTTTCGTGATACATTTAAAAACACAAAGTTGGTAAACATCTTTTGGAATGCAGTCTATGCGCTTACTGCTGCTGAATTTGAAAGCAAGATTACTGAGATGATGGAAATTTCACAAGATGTTATATCATGGTTTCAACAATTTCCTCCCTATCTTTGGGCTGTGGCATACTTTGATGGTGTTCGATATGGCCATTTCACACTTGGAGTAACAGAATTATTGTATAACTGGGCCCTTGAATGTCATGAGCTCCCTATAGTTCAGATGATGGAACACATCCGTCAGCTGATGGTATCATGGTTTAGTGATCGGCAGGATATGGGCATGAGGTGGACATCAATTCTTGTACCGTCAGCAGAGAAGCGAATTTTGGAGGCAATTGCCGATGCTCATTGCTATCAAGTTCTCCGGGCAAATGAAGTTGAGTTTGAAATTGTGTCCACTGAAAGGACCAATATTGTAGATATACGGAGTCGTGAATGCTCTTGTCGCCGTTGGCAGCTGTATGGATTACCTTGTGCCCATGCTGCTGCTGCACTTATCTCTTGTGGACACAATGCCCATATGTTTGCTGAACCATGCTTCACTGTACAAAGTTACAGAATGACCTATTCTCAGATGATTAATCCTATACCAGATAAGAGCCAATGGAGAGATCAGGGAGAAGGAGCTGAAGGTGGAGGAGGGGCAAGGGTTGATATTATAATCCACCCACCAAAGACTCGCCGGCCACCTGGGAGGCCTAAAAAGAAGGTTCTACGAGTGGAAAATTTTAAGCGTCCCAAAAGAGTTGTCCAATGTGGCCGCTGTCACATGTTAGGACATTCTCAAAAGAAATGCACAATGCCCATTTGA 1830 0.4311 MTLLFPCFGGYMANHSLVLDNTSVSTVTVAEQPLVIGQEFPDVETCRRTLKDIAIAMHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPGVPTFTVRTLQGEHTCEGVQNLHHQQASVGWVARSVEARIRDNPQYKPREILQDIRDQHGVAVSYMQAWRGKERSMAALHGTFEEGYRLLPAYCEQIRKTNPGSIASVVATGQENCFQRLFISYRASIYGFINACRPLVELDRAHLKGKYLGTLLCAAAVDADDALFPLAIAVVDTEGDDNWMWFMSELRKLLGVNTENMPRLTILSERQRGLVEAVETHFPTASHGFCLRFVSENFRDTFKNTKLVNIFWNAVYALTAAEFESKITEMMEISQDVISWFQQFPPYLWAVAYFDGVRYGHFTLGVTELLYNWALECHELPIVQMMEHIRQLMVSWFSDRQDMGMRWTSILVPSAEKRILEAIADAHCYQVLRANEVEFEIVSTERTNIVDIRSRECSCRRWQLYGLPCAHAAAALISCGHNAHMFAEPCFTVQSYRMTYSQMINPIPDKSQWRDQGEGAEGGGGARVDIIIHPPKTRRPPGRPKKKVLRVENFKRPKRVVQCGRCHMLGHSQKKCTMPI 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01018 609 MobiDBLite consensus disorder prediction 538 557 - -
Vian6g01018 609 ProSiteProfiles Zinc finger SWIM-type profile. 468 509 IPR007527 GO:0008270
Vian6g01018 609 Pfam MULE transposase domain 229 325 IPR018289 -
Vian6g01018 609 Pfam SWIM zinc finger 475 508 IPR007527 GO:0008270
Vian6g01018 609 SMART 26again6 484 511 IPR006564 GO:0008270
Vian6g01018 609 PANTHER POLYPROTEIN, PUTATIVE-RELATED 33 577 - -
Vian6g01018 609 Pfam MuDR family transposase 34 97 IPR004332 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01018 Vian-Chr6 27483905 27485734 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01018 - - gmx:100808214 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01018 6 27483905 27485734 Vian6g01018 6 27483905 27485734 ECH