Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01014 ATGGCAACGTGGGGTGCACATTCAATGTTGTTATCCCATGGGGAAGGCACATGCGCTCCCAACGTATCTGTAAAAGCAGGCCTTACTGTTAGAGGCGATTTAAGGTTTCACAGAACGAGAAAATTTAAATATGCTCCTCGAGTGGTAGTGCTCAAAGTGTTTTACACTGCCAGAAAGCCAACACGTTTGTGCTTGTTTAAACCTTATTGTAGTTTAGGGGGGAAACACAACCAAGGGATGGATTATTCTTCACGTGCTACTACTATACAAGTACCACGGATATTCAAATTCCTTGCTGACCGAATGCTTGTTGTTCTCAATTATTGGAATTGGAATAATTTACGCATCATGGGAATAGCTGGCTTATTGGTATCAATTTTAATGATCACTCCATCAGCTGATGCTGTTGATGCTCTTAAAACTTGTGCTTGCTTATTGAAGGATTGCAGGTTGGAACTGGCTAAGTGTCTTTCAAACCCATCTTGTGCTGCCAATATTGCCTGTCTCCAAACTTGCAACAATCGACCTGATGAGACTGAATGTCAAATTAAATGTGGGGACCTGTTTGAAAACAGTGTGGTTGATGAATTCAATGAGTGTGCAGTCTCACGGAAGAAATGTGTACCTAAGAAATCTGATGTGGGAGAATTTCCTGCTCCAAATCCTGATGTCCTTGTTAATAGCTTCAACATTGCGGATTTCAGTGGCAAATGGTTCATCACTAGTGGCTTAAATCCTACCTTTGATGCCTTTGACTGCCAATTACACGAGTTCCACACAGAATCCAATAAGCTTGTGGGTAATTTGACATGGAGAATACGGACTCCGGATGCTGGATTTATTACTAGGTCCGCTGAACAGAAATTTGTTCAAGATCCTTCCTATCCTGGGATCCTATACAATCATGACAACGAGTACCTTCACTATCAAGATGACTGGTATATTTTGTCATCAAAGATTGAGAATAAACCAGATGACTACGTATTTGTATACTACCGAGGCAGAAACGATGCATGGGATGGTTATGGAGGTGCTGTTGTGTACACAAGAAGTGCAGTTTTGCCAGAATCTATAGTTCCTGAACTTGAAAGAGCAGCCAAGAATGTAGGAAGAGACTTTAGCAAATTCATCAAGACAGATAACACATGTGGACCAGAGCCTTCCCTGGTGGAAAGGTTGGAGAAAAAGGTAGAGGAAGGAGAGGAGACCATTGTGAAGGAAGTTGAACAGTTAGAAGAAGAGGTGGAGAAGGTGGGGAAAACAGAGGTCACATTGTTTCAGAAGTTGGCAGAAGGGTTCAAAGTATTTCAAGAAGATGAGGAAAACTTCTTGAAAGGGCTTTCAAAAGAAGAAATGGAGATACTTAATGACCTCAAAATGGAAGCCAGAGAAGTAGAGAAGCTCTTTGGAAATGCCTTGCCCATAAGGAAACTAAGATAA 1440 0.4146 MATWGAHSMLLSHGEGTCAPNVSVKAGLTVRGDLRFHRTRKFKYAPRVVVLKVFYTARKPTRLCLFKPYCSLGGKHNQGMDYSSRATTIQVPRIFKFLADRMLVVLNYWNWNNLRIMGIAGLLVSILMITPSADAVDALKTCACLLKDCRLELAKCLSNPSCAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPKKSDVGEFPAPNPDVLVNSFNIADFSGKWFITSGLNPTFDAFDCQLHEFHTESNKLVGNLTWRIRTPDAGFITRSAEQKFVQDPSYPGILYNHDNEYLHYQDDWYILSSKIENKPDDYVFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKNVGRDFSKFIKTDNTCGPEPSLVERLEKKVEEGEETIVKEVEQLEEEVEKVGKTEVTLFQKLAEGFKVFQEDEENFLKGLSKEEMEILNDLKMEAREVEKLFGNALPIRKLR 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01014 479 Pfam VDE lipocalin domain 141 381 IPR010788 GO:0046422
Vian6g01014 479 CDD lipocalin_VDE 213 387 - -
Vian6g01014 479 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED 109 468 IPR044682 GO:0010028|GO:0046422
Vian6g01014 479 SUPERFAMILY Lipocalins 218 387 IPR012674 -
Vian6g01014 479 Coils Coil 390 421 - -
Vian6g01014 479 ProSitePatterns Lipocalin signature. 230 241 IPR022272 -
Vian6g01014 479 Gene3D - 212 394 IPR012674 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01014 K09839 - gmx:100778118 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01014 6 27457915 27460784 Vian6g01014 6 27457915 27460784 ECH