Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01002 ATGGCCACTCTTACTCTTCTTCGTTTCTTCTTGCTCCTCCTTCTACTAACGGTTCAGGTTGAATCCACCAACCTTAACTACACAACTGACAGGAAATTTAGCAGTTTGAGACTCCAAAGGATTCAGAGACACTTGGACAACATTAACAAGATCCCTCTCCTCACCATACAGAGAGTGCCAAGTGAGATGCCAAAGGGTATGAAGGTGAAGGAAAAGAGTGAAATGGGAATGGGAATGCAAAAGTGGCACCAAAATGGGACGCTGTGTCCAAAAGGAACCGTTCCCATACGGCGGAGCACCGTGCATGACGTGTTGAGAGCAAAGTCTTTGTTTGACTTTGGAAAGAAACGACGACGTTTCTCTCTCGCACGCAGCGACGCCCCCGATGTTGTCTCCGGTAACGGCCATGAGCATGCAATCGCATACACAGGATCAGCAGAGGAGGTGTATGGGGCAAAGGCAACAATAAATGTGTGGGAACCTTCTATCCAAGAGGTGAACGAATTTAGTCTGTCTCAGATTTGGATTCTTTCTGGTTCCTTCGATGGCTCAGATCTCAACAGCATTGAAGCTGGATGGCAGGTCAGTCCGGAGCTTTATGGTGACACCAGGCCAAGATTATTCACTTACTGGACGAGTGATTCATATCAGGCAACAGGATGCTATAACCTTCTCTGTGCTGGTTTTGTGCAAACAAACAGCAGAATAGCCATTGGAGCTGCCATTTCTCCCATTTCATCCTACGATTCTAACCAATACGACATCACCATCCTCGTTTGGAAGGACCCGAAAATAGGGAACTGGTGGATGAGTTTCGGCGATGGCACACTGGTGGGGTATTGGCCAGTGGAGTTATTCACACACTTGGCCACACATGCGACCATGGTGGAGTGGGGTGGCGAAGTGGTGAACACACGTGCGAACGGGCAACACACCTCCACCCAAATGGGATCTGGGCACTTTGCCGGAGATGGTTTTGGAAAAGCAAGTTATTTTCGTAACCTTGAGATTGTAGACACCGACAATAGTCTTAGCTCGGTGCACAACATCTTAACCCTAGCTGAGAACACCAACTGTTATGACATCAAGAGCTCCTATAGTAATGAATGGGGCACGTACTTCTACTATGGTGGCCCAGGTAACAGTCCTCAGTGCCCGTGA 1161 0.4823 MATLTLLRFFLLLLLLTVQVESTNLNYTTDRKFSSLRLQRIQRHLDNINKIPLLTIQRVPSEMPKGMKVKEKSEMGMGMQKWHQNGTLCPKGTVPIRRSTVHDVLRAKSLFDFGKKRRRFSLARSDAPDVVSGNGHEHAIAYTGSAEEVYGAKATINVWEPSIQEVNEFSLSQIWILSGSFDGSDLNSIEAGWQVSPELYGDTRPRLFTYWTSDSYQATGCYNLLCAGFVQTNSRIAIGAAISPISSYDSNQYDITILVWKDPKIGNWWMSFGDGTLVGYWPVELFTHLATHATMVEWGGEVVNTRANGQHTSTQMGSGHFAGDGFGKASYFRNLEIVDTDNSLSSVHNILTLAENTNCYDIKSSYSNEWGTYFYYGGPGNSPQCP 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01002 386 Gene3D - 161 274 - -
Vian6g01002 386 FunFam Putative carboxyl-terminal proteinase 158 278 - -
Vian6g01002 386 Pfam Neprosin 167 379 IPR004314 -
Vian6g01002 386 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 47 381 - -
Vian6g01002 386 Pfam Neprosin activation peptide 55 142 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01002 Vian-Chr6 27293073 27295638 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01002 - - gmx:100789333 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01002 6 27293073 27295638 Vian6g01002 6 27293073 27295638 ECH