Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00501 ATGGGTAGCAGCAGCAACTCCTCCTCGTCGGATTTCTTCTACCGCCGGCACGTGTTCCTGTGCTACAAGAACCCCGCCGTGTGGCCACCGCGCATTGAGGCTGCAGAGTTTGATCGCTTGCCCAGACTGCTCCATGCGGCCATTAATGCAAGAAAGCCTCATATTAAGAAAGAGACCTGCTTAACAATATGTGAGGGGCATGATGGGACTGAAACATCAAATGGAGATGTGTTAATCTTTCCTGACATGATCAGATATAGGAGATTAACCCATTTTGATGTTGAGACATTTGTTGAAGAAGTTATTGTCAAGGAAGGAGAATGGCTTCCTGGAAATCCTGAATCCTTAAAAGCTTCATATGTTTTTGTCTGCTCTCATGGATCACGCGATCGTAGGTGTGGGGTTTTTGGACCTGTCTTGGTCAGTAGATTCAGGGAAGAGATAGGGTTACATGGACTCCAAGGCAAAGTGTTGGTTAGCTCCTGCTCTCACATTGGGGGCAATAAGTATGCAGGAAATGTCATTATAATTGGATCAAGCATCAACGGCGAAGTCACAGGCCACTTGTATGGATATGTTACTCCAGATGGTGTGCCTTTATTGTTTCGCCAGCATATCATTGCAGGGGAGATTTTTGACTCACTATGGAGGGGTCAAATAGGTTTATCAGAAGATGAACAGAAGAAAAAGCAAGAGCAAAGGCTTCAGCTGAATGGTGCAAGAAATTTAGAAGGAAACACAGTGGCCGGCAGCCGCTGTCAAACAGTTGGAGAGAGCTGTTGCCAGGACAATGAAGATTCTTGTTGCTGTCAGAATGATGTATTAGAGGAAAGGAGAGAGGTTTCAGGTGATCATAAGAGCAAGGAGAATTTGAATGTGCTTCGTCGGATCAACAAAGGAGTGTCTCACAAGTTCAGTTCCATGCCGACATGGCTTGACAGCTGGGAGCAAGAGGATACTTATGCTGCTCTTGCTGTTGTCTGTGCCGCCGTGTCGGTCGCCATAGCTTATAGCTGCTACAAGCAGTGA 1029 0.4626 MGSSSNSSSSDFFYRRHVFLCYKNPAVWPPRIEAAEFDRLPRLLHAAINARKPHIKKETCLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVIVKEGEWLPGNPESLKASYVFVCSHGSRDRRCGVFGPVLVSRFREEIGLHGLQGKVLVSSCSHIGGNKYAGNVIIIGSSINGEVTGHLYGYVTPDGVPLLFRQHIIAGEIFDSLWRGQIGLSEDEQKKKQEQRLQLNGARNLEGNTVAGSRCQTVGESCCQDNEDSCCCQNDVLEERREVSGDHKSKENLNVLRRINKGVSHKFSSMPTWLDSWEQEDTYAALAVVCAAVSVAIAYSCYKQ 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00501 342 FunFam APD1p protein 118 217 - -
Vian6g00501 342 Gene3D Glutaredoxin 118 218 - -
Vian6g00501 342 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 13 331 IPR009737 -
Vian6g00501 342 CDD TRX_Fd_Sucrase 119 220 IPR009737 -
Vian6g00501 342 Pfam Sucrase/ferredoxin-like 14 218 IPR009737 -
Vian6g00501 342 SUPERFAMILY Thioredoxin-like 120 222 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00501 Vian-Chr6 20125551 20128760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00501 - - vun:114187290 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00501 6 20125551 20128760 Vian6g00501 6 20125551 20128760 ECH
Vian6g00501 6 20125551 20128760 Vian7g01097 7 19180647 19183411 PCT