Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00492 ATGTCTCTTGGGTATGCCGAGAAGCTTTCCTACATAGAAGATGTGGGCAACGTTGGAATGGTCGAATACTTCGACCCATCTCACGTTTTGCGAGAGAAAGTAAATGCGGCTGCAATTGGGGTTGCGATAGATCAACTTGCTATTATGATAAAAAAGAGTAAGCATCTAGTGGTGTTTACAGGTGCAGGAATATCAACTTCATGTGGTATACCTGATTTTCGAGGGCCCAAGGGAATATGGACGCTTCAGCGAGAAGGTAAAGCCTTGCCTGAAGCATCATTGCCATTTCACCGTGCAGCACCAAGTTTGACACACATGGCTTTGGTTGAATTAGAAAAGACTGGCATTTTGAAGTTCGTCATCAGTCAGAATGTTGATGGTCTCCATCTTCGATCCGGAATACCAAGGGAGAAACTAGCTGAATTGCATGGGAACTCCTTCATGGAGGTGTGCCCTTCTTGTGGAGAAGAGTACTTTCGTGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACGTCAAGGCGTTGTACAGTATCCAAATGTGGGACAAGACTTAAGGATACTGTCCTTGACTGGGAGGATGCATTGCCTCCAAAGGAGATGAATCCTGCTGAGAAGCACTGTAAACAGGCAGATATAGTGTTATGTTTGGGTACAAGCTTACAAATAACTCCAGCATGCAACTTGCCTCTGAAAGCACTTCGTGGTGGGGGTAAAGTTGTTATTGTAAATCTCCAGAAAACTCCAAAGGATAAAAAAGCCAGCTTAGTCATACATGGGTTTGCAGATAAGGTAATTGCGGGTGTCATGGACCAGCTTAATATGCAGATTCCTCCATTTGTCAGGATTGATCTTTTCCAGATTGTTCTAGTGCAAGCTTTGAGCAATGATAAAAGATATGTGAACTGGACTCTCCAGATTGCCAGTGTTCATGGACAAAGAGCCGCATTGCCTTTCATTGAGTCTGTTGAGGTCTCCTTCTTGGACAGGGAAGATTACAAAGCAGCCATTCTAGATAAGCAACCATTTCGGCTTAAAAGGAGAACAGCATATAACAAAGCATTTGAAATGGTTCTGAAACTCAACTTCAGTGATGGCTGTGGTTGCTCATCCCTTGAAATTGATGTCCCAGTTGATTTTAAAGTTTCGACTGACTGCTTTGTCTTTGATAAGGACTACATATTCCAAAAGCTGAGAGACAAGGCAGTTCTTGAATCAAGATGTGGTCAGAACGGTGTTATTGAGAGAAAGACCATTTTGACAGCTAGAAGTGATGTCACTACCTATGCCATTGTGACCAATGTTGTTCAGTACAGCAAAACATGTAAAGCAGCCCTTGATTCTCTAAGTAATGGTGATCTTAAAAAAAGAAAAGCTAGTGTGACAGGTACAGGATCATCTAGGAAGCGTTCAAAAGGGTCTTCCAAGTGTAAATCCAGATCAGGTGTTCTTGGTGTGGCTATTGGAATGTTTCTATTATGA 1482 0.4231 MSLGYAEKLSYIEDVGNVGMVEYFDPSHVLREKVNAAAIGVAIDQLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAAPSLTHMALVELEKTGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEVCPSCGEEYFRDFEVETIGLKETSRRCTVSKCGTRLKDTVLDWEDALPPKEMNPAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQKTPKDKKASLVIHGFADKVIAGVMDQLNMQIPPFVRIDLFQIVLVQALSNDKRYVNWTLQIASVHGQRAALPFIESVEVSFLDREDYKAAILDKQPFRLKRRTAYNKAFEMVLKLNFSDGCGCSSLEIDVPVDFKVSTDCFVFDKDYIFQKLRDKAVLESRCGQNGVIERKTILTARSDVTTYAIVTNVVQYSKTCKAALDSLSNGDLKKRKASVTGTGSSRKRSKGSSKCKSRSGVLGVAIGMFLL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00492 493 ProSiteProfiles Sirtuin catalytic domain profile. 36 276 IPR026590 -
Vian6g00492 493 Gene3D - 45 271 - -
Vian6g00492 493 CDD SIRT7 54 260 - -
Vian6g00492 493 SUPERFAMILY DHS-like NAD/FAD-binding domain 40 301 IPR029035 -
Vian6g00492 493 PANTHER NAD-DEPENDENT HISTONE DEACETYLASE HST4 43 274 - -
Vian6g00492 493 MobiDBLite consensus disorder prediction 457 478 - -
Vian6g00492 493 Gene3D - 144 193 - -
Vian6g00492 493 FunFam NAD-dependent protein deacetylase sirtuin-6 isoform X2 45 143 - -
Vian6g00492 493 Pfam Sir2 family 61 84 IPR003000 GO:0070403
Vian6g00492 493 Pfam Sir2 family 95 225 IPR003000 GO:0070403
Vian6g00492 493 FunFam NAD-dependent protein deacetylase SRT1 144 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00492 Vian-Chr6 19909176 19931830 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00492 K11416 - gmx:100803586 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00492 6 19909176 19931830 Vian6g00492 6 19909176 19931830 ECH