Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00445 ATGGCAACAAACCAGATCCTGAGAGAACTACAATGGGCTCAGCAAGCCATCAAATCAGAGGGCCTAAATCTGCACAGTATTTCCTTCTACCTCTCTCAACCAACTTCAGGTTGTTATCAAGAAACAGACAACTCCATAAGCATAAACATTTCCAAGGAAAACCTTCCATTCTTTTCCCCTCTCTTGACTACTCTTGCAGCACCTGGGAGACACAACTCCTCCTTGAGAAACTTGGAGTTCCACAGAGTTGAATGGGACTCACAACAGGTAAGACATCTTGGCACCTTGCTGGGGAATAACCAAAATGTACAGCATTTGGATTTTAGAAGAAACAGATTCAATGGAAAAAGCCTATCAGACCTTTCTGACATTCTGAAGGCAAATAAAGTGATCAAAGAGATCATGCTTTCAGAATCAGGCATAGGGTCTGTTGGAGCTGGACTGATTGCTTCTGCTCTTATGGTGAATGACAGTTTGGAGGAGCTTCAGATATGGGAAGACTCAATAGGATCAAGAGGTGCCGAGGAGCTTTCGAAGATGATTGAAGTTAACTCAACTCTTAAACTGTTGACAATTTTTGACTCAAATGCCATCACAGCTACACCTCTTATATCTGCAGTTTTGGCAAGGAACAGAAGAATGGAAGTTCATGTTTGGAGTGGGGAGAATAGAGAAAAGAGTTCCAAGATAGTTGAGTTTGAACCTGAGAACGGCACACTTAGAATTTACAAGCTTAACCTCTCAGGGACTTGTAGAGTTACCTGCTCTTTAGGCATGAACTTCACTGTGAAGTCCCTTGACATGACAGGAGTAAGGCTAAAATCCCGGTGTGCCAAGGAATTTAGGTTGGTTTTGGAACAAAACCAGACCCTCAAAGAGGTCAATTTGTCTAGAACATACCTTAAAGACAAGGGCATTGTGTATATTGCAGCAGGCCTCTTCAAGAACAAAACTCTGCAAACCTTACACCTGAGTGGAAATTGGTTCAGTGGCATGGGCGTGGAACATCTATTATGCCCTTTGAGTAGATTTTCATCACTTCAAAGGCAAGCCAACATTACTTTGACATGTATTACTTTTGGAGGAGAAAGAACAAGAATAGGAAGAGATGGGCTAGCTGCCGTTATACAGTTTCTTACAACAAATGAAACAGTGCGGAAGTTGGGAATTCATGATGATGAGAGTTTGAGATCAGATGACTTTGTTAAAATCTTCAAGAGTTTGGAGAAGAATGCTAGCTTGAAATGCTTGTCTCTTCAAGGATGCAAACGTGTGGAGGGAGAGATACTGCTGCAGACAATTGTGGAGACACTGCAGATAAATCCTTGGATTGAAGATATTGATCTCTCCAGAACACCTTTACAAAACTCTGGAAATACTCAGCGAATTTATCAGAGGTTAGGCCAGAATGAAAAGACTGAACCAGATATGGATTCTGTCAAGGATATGCCTTTAACAGAACCCAAGAGTTGCAGAGTTTTCTTTTGTGGCCAAGAATGTGCAGGCAAAACCTCACTTTGTCATTCAATATCACAAAATTTCTCTGCTTCGCCGCTTCCCTACTTGGATCAAGTCAGAACAATAGTGAACCCAGTGGAGCAGGCAGTCAAATCAGTAGGAATGAAGATAAAAACTTTCAAGGATGAGGATACAAGGATTTCAATATGGAACCTTTCTGGTCATCACGAGTTTTTATCTCTCCATGATCTTATGTTCCCAGGGCATGGGAGTGCATCATTTTTCCTCATCATATCAAGTTTATTCAGGAAACCAAGTAACAAAGAACCAAAAAGCTCAACAGAAATTGAAGAGGACCTGCAGTATTGGCTCAGGTTCATAGTTTCCAATTCTAAAAGAGCAATACAACAATGCATGCTACCAAGTGTTGCTGTTGTTCTCACACACTCTGACAAAATCAATCAACCATCACAAAATTTTCAGCTCGCAGTAGAGTCAATTCAGAGACTTAGAGACAAGTTTCAAGGCTTTGTTGATTTTTACCCAACTGTTTTCACAGTTGATGCAAGATCATCAGCATCAGTTAGTAAACTCACTCATCACATCCGAAAGACGAGCAAGACAATTCTTCAAAGAGTGCCACGGGTCTATCAACTTTGCAATGATCTGATACAGATTTTATCAGACTGGAGATCTGAGAACTACAACAAGCCAGCCATGAAGTGGAAGGAATTTGGTGAGCTATGCCAAGTGAAAGTTCCACTTTTGAGAATTCGATCAAGACATGACAACAAAGAGAAGGTAGAGATGAAGAGAAGAGCTATTGCTACCTGTCTTCATCACATTGGTGAGGTGATTTATTTTGATGAGTTGGATTTTCTAATCTTAGATTTTGAGTGGTTCTGTGGCGAAGTCCTTGGTCAGCTCATAAAGTTGAATGTTAAGAAGCAACACTCTGAAAACAATGGATTTATTAGCAGGAAGGAATTAGAAAAAATCTTAAGAGGAAGTTTGCAGAGCCCTATTCCTGGTATGGGTTCAAAGATTTTTGAGAATTTAGACGCTAGTGACCTTGTAAGGATGATGCTAAAACTTGAACTTTGTTATGAGGAAGATCCATCAGATCCAAATTCCCTGCTATTGATTCCTTCCATTCTTGAAGAAGGCAGAGGAAAGCCTCAGAGGTGGCAGCTAAGCATGCCAGACTGCATTTACACAGGACGTCATCTTGAGTGTGATGATTCAAGCCACATGTTTCTAACTCCAGGATTTTGGATTTTATTTTATTTCTCTGCTTTGGTGTTGCAGGTGCACCTTCACAACAGAATAAAGGCTGTTAAGGATCAGCATGGTGCAACTTACAGTCTTGAGAAGTACCTTATTTCAATCAGCATTAACGGAATCTACATAAGAGTAGAACTTGGAGGAGAGTTGGGTTACTATATTGATGTCCTTGCATGCTCCACCAAAAACCTGACAGAAACTTTAAGAGTCATTCATCAAATTGTAATCCCCGCAATCCAAAGTGTTTGCCAAGGGATCACCTTGACTGAGAATGTCTTAAGACCTGAATGTGTGAGAAAACTGACACCTCCTAGATACAGAAAAACTCAATTTGCTCCTCTGCAGCAGCTGAAACAAGCACTACTTTCACTTCCAGCAGAAAGCATGTATGATTATCAACACACATGGAGTCCAGTCCTAGACTCTGGTAAGCCTATCCTCCAAGACGGATTTGATTTTGCACGAGACCTTTTATCTGATGATGACTTCCGGGAAGTTCTTCATAGAAGGTATAATGACCTTTACAATCTTGCACAAGAGCTGCAAGTTCCACCTGAAAATAACCCTGAAGGGCAAGGTCAATCTATAACCTTAAGAGATGAAGCTGCAAGGGTTGAACCAACTTTTGGTGGCATTGCAAAAGGGGTTGAAGAAGTTTTGCATAGACTCAAGATTATTGAGCAAGAAATCAGAGACTTGAAACAGGAAATCCAGGGGCTTAGATATTATGAACATAGACTTCTCCTTGAACTTCACCGCAAAGTGAACCACCTTGCAACCTTTAATGTGCAGGTTGAGGAGAGGAAAGTCCCCAACATGATATATTTTGTAAGGACAGAAAACTACACAAGAAGACTGGTCACCACCATGCTTTCTGGCATGAATGCTCTCCGGCTTCACATGTTATGCGAGTTCCGAGGACAAATGCATGTTGTTGAAGATCAGATGGGGTGTGAAATCATGCAAGTTGATAATGCTGCTGTGAAGTCTTTGGCTCCATACATGAAGAAGTTCATGACATTGGTAACTTTAGCTCTTAAAATAGGAGCTCATCTTGCAGCTGGAATGGGGCAAATGATACCTGACTTGAGTAAGGAGGTGGCTCACTTGGCTGGCTCTTCAGTTCTCTGTGGTGCAGCTGGGGCAAGTGCAGCAGGCGTTTTAGGTGCTGCCGCTATGGGTCGTAGAAACAGGTCCGTGGAAGGTTCAAGGGACATTCAACAAGACTTAAGAGCAGCACAGCAATGGGTGGTTGATTTCTTAAGGGAGAGAAAGTGTTCCTCAGGGAAGGATATTGCAGAAAAGTTTGGACTGTGGCGAGTCAGGTACAGGGACAACGGTGAAATTGCATGGATATGCAGGAGGCACATATATGCAAGATCTGCAGAGATAATTGAAGTACCAATTTGA 4152 0.4164 MATNQILRELQWAQQAIKSEGLNLHSISFYLSQPTSGCYQETDNSISINISKENLPFFSPLLTTLAAPGRHNSSLRNLEFHRVEWDSQQVRHLGTLLGNNQNVQHLDFRRNRFNGKSLSDLSDILKANKVIKEIMLSESGIGSVGAGLIASALMVNDSLEELQIWEDSIGSRGAEELSKMIEVNSTLKLLTIFDSNAITATPLISAVLARNRRMEVHVWSGENREKSSKIVEFEPENGTLRIYKLNLSGTCRVTCSLGMNFTVKSLDMTGVRLKSRCAKEFRLVLEQNQTLKEVNLSRTYLKDKGIVYIAAGLFKNKTLQTLHLSGNWFSGMGVEHLLCPLSRFSSLQRQANITLTCITFGGERTRIGRDGLAAVIQFLTTNETVRKLGIHDDESLRSDDFVKIFKSLEKNASLKCLSLQGCKRVEGEILLQTIVETLQINPWIEDIDLSRTPLQNSGNTQRIYQRLGQNEKTEPDMDSVKDMPLTEPKSCRVFFCGQECAGKTSLCHSISQNFSASPLPYLDQVRTIVNPVEQAVKSVGMKIKTFKDEDTRISIWNLSGHHEFLSLHDLMFPGHGSASFFLIISSLFRKPSNKEPKSSTEIEEDLQYWLRFIVSNSKRAIQQCMLPSVAVVLTHSDKINQPSQNFQLAVESIQRLRDKFQGFVDFYPTVFTVDARSSASVSKLTHHIRKTSKTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFGELCQVKVPLLRIRSRHDNKEKVEMKRRAIATCLHHIGEVIYFDELDFLILDFEWFCGEVLGQLIKLNVKKQHSENNGFISRKELEKILRGSLQSPIPGMGSKIFENLDASDLVRMMLKLELCYEEDPSDPNSLLLIPSILEEGRGKPQRWQLSMPDCIYTGRHLECDDSSHMFLTPGFWILFYFSALVLQVHLHNRIKAVKDQHGATYSLEKYLISISINGIYIRVELGGELGYYIDVLACSTKNLTETLRVIHQIVIPAIQSVCQGITLTENVLRPECVRKLTPPRYRKTQFAPLQQLKQALLSLPAESMYDYQHTWSPVLDSGKPILQDGFDFARDLLSDDDFREVLHRRYNDLYNLAQELQVPPENNPEGQGQSITLRDEAARVEPTFGGIAKGVEEVLHRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNHLATFNVQVEERKVPNMIYFVRTENYTRRLVTTMLSGMNALRLHMLCEFRGQMHVVEDQMGCEIMQVDNAAVKSLAPYMKKFMTLVTLALKIGAHLAAGMGQMIPDLSKEVAHLAGSSVLCGAAGASAAGVLGAAAMGRRNRSVEGSRDIQQDLRAAQQWVVDFLRERKCSSGKDIAEKFGLWRVRYRDNGEIAWICRRHIYARSAEIIEVPI 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00445 1383 Coils Coil 1130 1157 - -
Vian6g00445 1383 Gene3D - 490 694 IPR027417 -
Vian6g00445 1383 Pfam C-terminal of Roc, COR, domain 755 879 IPR032171 -
Vian6g00445 1383 SMART LRR_RI_2 128 155 - -
Vian6g00445 1383 SMART LRR_RI_2 156 183 - -
Vian6g00445 1383 SMART LRR_RI_2 316 343 - -
Vian6g00445 1383 SMART LRR_RI_2 288 315 - -
Vian6g00445 1383 Pfam Leucine Rich repeat 315 337 IPR001611 GO:0005515
Vian6g00445 1383 Gene3D Ribonuclease Inhibitor 235 354 IPR032675 -
Vian6g00445 1383 Gene3D Ribonuclease Inhibitor 52 218 IPR032675 -
Vian6g00445 1383 Gene3D Ribonuclease Inhibitor 355 477 IPR032675 -
Vian6g00445 1383 PANTHER PROTEIN TORNADO 1 1 1382 - -
Vian6g00445 1383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 691 IPR027417 -
Vian6g00445 1383 SUPERFAMILY RNI-like 10 469 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00445 - - gmx:100817598 2472.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00445 6 18659433 18664155 Vian6g00445 6 18659433 18664155 ECH