Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00436 ATGAGTTTCTCAGTGGCAGCTTCGTTGGGTACTCATATTGCACTGAGAAACACTCATGAAGCAACAAGAATCAAGTGCCACTTTTTGTACAGAAGAGAAGAGAACAGTAAAATTGGTTTCAAGTTCTCAAAGCACAAGGTCGTTCAAAGAAAAATCTCTCTAAGCAAGCATGAGTTCAGTGAGTTGGATGAGAGGAAGAGCCCAGATGAGGTTAGAGAAGAGATTAAAAAATGTTATGAACTCATAAACAGATTAGGGAGAGGAGCTGTGTATCTGGGTTCTTCAAGGATGGGACCCAGCCATTCACATTATATAGCAAATCTTTTGGATTGCACTACTTGGTCAGGGGCTGGACCAGGGCTAATGGATGCCGTTACTCAGGGTGCTATGCTAGCAGGAAAACCGGTTGGTGGATTCAAGATAGGAAAAGAAGCTGGTGAATGGACAGCATCTAATTTTCATGCATACTTACCATCAGAAAATTACCTCACCTGCAGGTTTTTCTCTGCAAGGAAGCATGGGCTGGTGGATGCTGTAGTGAGGAACAATTCATTTGATAAGACTGCTGTGGTTGCCCTTCCTGGTGGGATTGGTACTTTAGATGAGGTGTTTGAGATGCTGGCATTGATTCAGCTGGAACGGATTGGATCAAAGCTTCCTATTCCTTTGCTCTTGATGAACTATGATTCATTTTATTCAAAGCTGCTTGACTTTTTGGATGATTGCGAGGGTTGGGGAACAGTCTCTAAAGGAGAGGTCGCATCATTGTGGAAGGTTTGTAACAGCAACTCAGAAGCCTTGGCGTACCTAGAAGAATTCTATGGCATTTCTTCTATTGACAAAAGTAAGAATGTAACTAAATTTCATAGCACGTATGGATCACCCTCCTCATAA 894 0.4239 MSFSVAASLGTHIALRNTHEATRIKCHFLYRREENSKIGFKFSKHKVVQRKISLSKHEFSELDERKSPDEVREEIKKCYELINRLGRGAVYLGSSRMGPSHSHYIANLLDCTTWSGAGPGLMDAVTQGAMLAGKPVGGFKIGKEAGEWTASNFHAYLPSENYLTCRFFSARKHGLVDAVVRNNSFDKTAVVALPGGIGTLDEVFEMLALIQLERIGSKLPIPLLLMNYDSFYSKLLDFLDDCEGWGTVSKGEVASLWKVCNSNSEALAYLEEFYGISSIDKSKNVTKFHSTYGSPSS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00436 297 Gene3D - 68 291 - -
Vian6g00436 297 Pfam Possible lysine decarboxylase 122 269 IPR031100 -
Vian6g00436 297 PANTHER EXPRESSED PROTEIN 244 285 - -
Vian6g00436 297 SUPERFAMILY MCP/YpsA-like 75 271 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00436 - - gmx:100803538 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00436 6 18322132 18324812 Vian6g00436 6 18322132 18324812 ECH