Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00432 ATGCCACATAGAAAAGGTTGCAGTGTTTTTAATGACCCTTGTTTTGTTGCCAAGAAATTCTTGGCAAGACCTCAGCATGAGGGAGTTGGAGCTGTTGTCAGAAGAAGCATAGGAAGGTTTGAGCTCAAGTACTTTGATCCCTTCCTTATGCTGGATGAATTCTCAGGCTTTGAGACAGTCACATACATGTTGCAGAATATCAACAGCTATTACCAACTTGTACCTAAACTTGTGAAGGGAGCTATCACGCATGAAGATTTTGAAGGACATAAAGGGACTATAGAAGCTGGTGACTTGCAATGGATGACTGCTGGGAGAGGGATTGTGCACTCAGAAATGCCTGTTGCACAAGGAACACAAAAGGGTCTTCAATTGTGGATCAACCTTGCTTCCAAATATAAAATGATTGAACCAAGGTATCAAGAGGTGTTGAGTAAGGACATAGCAGAAGCTGAGGATGATGGTGTGAAGGTTAGAGTTATAGCTGGGGAATCACTGGGGATAAAGTCTCCAATCTACACAATGACTCCAACCATGTTCTTGGATTTCTCTCTCAAACCTGGAGGACACTTGCAGCAACCTATACCAGAAACTTGGAATGCTTTTGTGTATATATTGGAAGGAGAGGGTATCTTTGGAAACATGAAATCTCAACCTTCAAATTCTCACCATATTCTTCTTCTTGGCCATGGTGATGGTCTAGAGGCATGGAACAAATCTTCTAAGCTCCTTAGGTTCATATTGGTTGGAGGAGAGCCTTTGGGGGAACCTTTAGTGCAATTTGGACCCTTTGTGATGAACACTCAAGAGGAGATTGACCAAACCATTAATGATTTTGAGAACTTTGCTAATGGATTTGAGAAAGCAAGAGATTGGAGATCTGAAAAGGATATGAATTAA 900 0.4144 MPHRKGCSVFNDPCFVAKKFLARPQHEGVGAVVRRSIGRFELKYFDPFLMLDEFSGFETVTYMLQNINSYYQLVPKLVKGAITHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPVAQGTQKGLQLWINLASKYKMIEPRYQEVLSKDIAEAEDDGVKVRVIAGESLGIKSPIYTMTPTMFLDFSLKPGGHLQQPIPETWNAFVYILEGEGIFGNMKSQPSNSHHILLLGHGDGLEAWNKSSKLLRFILVGGEPLGEPLVQFGPFVMNTQEEIDQTINDFENFANGFEKARDWRSEKDMN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00432 299 SUPERFAMILY RmlC-like cupins 16 294 IPR011051 -
Vian6g00432 299 CDD cupin_pirin_N 31 129 - -
Vian6g00432 299 Pfam Pirin 33 127 IPR003829 -
Vian6g00432 299 Gene3D Jelly Rolls 27 280 IPR014710 -
Vian6g00432 299 Pfam Pirin C-terminal cupin domain 180 284 IPR008778 -
Vian6g00432 299 CDD cupin_pirin_C 177 253 - -
Vian6g00432 299 Gene3D Jelly Rolls 149 254 IPR014710 -
Vian6g00432 299 PIRSF Pirin 13 293 IPR012093 -
Vian6g00432 299 PANTHER PIRIN-RELATED 10 296 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00432 Vian-Chr6 18290156 18293393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00432 13 290 Calmodulin-binding Proteins AT3G59220 53.925 5.62e-108 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00432 K06911 - gmx:100802484 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00432 6 18290156 18293393 Vian6g00432 6 18290156 18293393 ECH
Vian6g00432 6 18290156 18293393 Vian7g01140 7 19627207 19630130 PCT