Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00431 ATGTGGAAACCACGCGTTCTTCTCCGTTCATTCTTTCTCCTACAGTTTCTTCTTCTTCACTCGGTGCTTCGTCAGGTCTCTGCACAAGGATCCAACGCAACCACTTGGAACACTCTCTCTGGAAATCCACCGTTGGTCATAGCTCGTGGTGGGTTTTCAGGGATATTTCCTGATTCCAGTGAAAGTGCGTATCTTTTTGCTGTAACAGCTAGTTTAAAAAATGTCATTCTATGGTGTGACGTGCAATTAACGAAAGATTCGCAGGGGATTTGCGTCCCGGACCTCAAGCTTGAAAATGCCACTAATATTGCTCAAATTGCTAAATATAAAAGTAGCACTTACCCAGTTAATGGTGTAACAACCAGCGGCTTTTTTTCTGTGGATTACACCTTAAAGGAGCTACGTTCCAACAATGTCTTCCTGGTTCAGGGAAATTACGTACGAACAAACAGGCTTGATTACAATGCATTCAAAATTCTTTCTGTGAATGATGTGGTTGAAACAGCATCCCCGCCAGGATTGTGGTTGAATATACAGCATGATGCATTCTACACACAACACAAATTGAGTATGAAAAACTTCGTACGTTCTGTTTCCACAACAGTAAATGTCAGTTACATCTCATCACCTGAAGCTGGTTTCCTCAGAAGCATTAGAACATTCATCAACCCAAAAACAACAAAACTGGTCTTCAGGTTTCCGAAAAACGAGGAAGTAGATCCATCAACCAACCAGAGTTATGCTTCACTGTTAAAAAATCTAACATCTATCAAGACATTTGCTTCAGGAATTCTTGTTCCCAAAGGCTACATATGGCCTGTGGATCCAAAGAGTCATTATCTACAACCTCATACATCTTTGGTCTCCGATGCGCACACAGTGGGGCTGGAAGTCTTTGCTTCAACTTTCATGAATGATATTCCAATCAGCTACGATTACAGCTATGACCCTATTGCCGAGCACCTAAGTTTCATTGAGAATGGAAACTTCTCTGTTGATGGTGTGTTGTCTGACTTCCCTCTAACGTCATCTGCAGCTATAGACTGCTTTGCACACATGGGCCTCAATGATCCGAAAAAAGTAAACACTTTGGTCATCTCAAAATATGGAGCGAGTGGAGAATATCCTCCTTGTACCGACTTAGCGTATGAAAAGGCTTTTTCAGATGGTGCGGATGTTCTTGACTGTCCTGTTCAGATGTCAAAGGATGGAATACCGTTTTGCTTTAGCTCTATTGATCTTATCCCGAACACAAATGTTGCTCGATCAGAATTCAGCAGCCTTAGCAAATCTATTCCAGATATCCAATCTGGTGATGGAATATTTGCATTCGACTTGTATTGGAATGATATATCAAGCTTGACCCCCTCAATGCTGAGCCCGTTTAGCAACTTCAATTTGTATAGAAATCCAAAATTTAACGAGACAGTAAAATTGTTAACATTGTCAGAGTTTTTGAATTCCACGCAAGGTCTAGGTGTTGTGATCATCATTGAGAATGCACCATATCTTGCAAGGACACAAAACTTAAGCGTGATTGATGCAGTCACTGATAGTTTGAGCAAAGCAGATTATGATAAACCAGGAGCTTCAAACGTTATGATTCAGTCTACTGACAGTTCTGTTCTACTGAAATTCAAGGAGAAAACAAAGTATGAACTTGTCTACATGATTGATGAGTTAGTTGGAGATATCGCTGATTCAGCTCTTTCGGATATCAGAAGATTTGCTAGTTCTGTGGTTATCAAAAAGGGTTCTGTGTACCTGACAAATGAATACTTCGTGACTGGCTCTACAAAGACGGTGCCAAAGTTAAAATCTTCTAATCTCTCTGTTTACGTACAAACATTCCACAATGAATATGTATCTCAGTCATGGGATTTCCTGTCAGATCCAATTGTGCAGATCAACACATTTGTTCAGGATGCTCGCATTGATGGTCTCATCACAGGCTTCCCTCAAACAGCCAACAGATACAGAAGGAACAGATGCTTAAATTTGGGTAACAGCACTCCTAATTACATGAAACCAGTTGAAATAGGAGGCCTTTTTCAACTCATAGACAAATCTTCCTTACCACCAGCTATGGCTCCAATCCCTCCCCTGATTGAAGCTAATGTAACAGAACCCCCTTTGGCTCCCTCTTCTGAAATAGTCCCATCTAGTTCTATTGCTGGAGCACCAGGAGCACAACCAACACAAAATGCACAGCCTAAGGTTGCTGTCTGCTTCACCATCTCCTCTCTCACAGTGCTTGTAGCCTCTCTTCTACTTTGA 2277 0.4133 MWKPRVLLRSFFLLQFLLLHSVLRQVSAQGSNATTWNTLSGNPPLVIARGGFSGIFPDSSESAYLFAVTASLKNVILWCDVQLTKDSQGICVPDLKLENATNIAQIAKYKSSTYPVNGVTTSGFFSVDYTLKELRSNNVFLVQGNYVRTNRLDYNAFKILSVNDVVETASPPGLWLNIQHDAFYTQHKLSMKNFVRSVSTTVNVSYISSPEAGFLRSIRTFINPKTTKLVFRFPKNEEVDPSTNQSYASLLKNLTSIKTFASGILVPKGYIWPVDPKSHYLQPHTSLVSDAHTVGLEVFASTFMNDIPISYDYSYDPIAEHLSFIENGNFSVDGVLSDFPLTSSAAIDCFAHMGLNDPKKVNTLVISKYGASGEYPPCTDLAYEKAFSDGADVLDCPVQMSKDGIPFCFSSIDLIPNTNVARSEFSSLSKSIPDIQSGDGIFAFDLYWNDISSLTPSMLSPFSNFNLYRNPKFNETVKLLTLSEFLNSTQGLGVVIIIENAPYLARTQNLSVIDAVTDSLSKADYDKPGASNVMIQSTDSSVLLKFKEKTKYELVYMIDELVGDIADSALSDIRRFASSVVIKKGSVYLTNEYFVTGSTKTVPKLKSSNLSVYVQTFHNEYVSQSWDFLSDPIVQINTFVQDARIDGLITGFPQTANRYRRNRCLNLGNSTPNYMKPVEIGGLFQLIDKSSLPPAMAPIPPLIEANVTEPPLAPSSEIVPSSSIAGAPGAQPTQNAQPKVAVCFTISSLTVLVASLLL 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00431 758 CDD GDPD_SHV3_repeat_1 44 346 - -
Vian6g00431 758 Pfam Glycerophosphoryl diester phosphodiesterase family 79 341 IPR030395 GO:0006629|GO:0008081
Vian6g00431 758 Pfam Glycerophosphoryl diester phosphodiesterase family 370 654 IPR030395 GO:0006629|GO:0008081
Vian6g00431 758 SUPERFAMILY PLC-like phosphodiesterases 42 345 IPR017946 GO:0006629|GO:0008081
Vian6g00431 758 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 11 749 - -
Vian6g00431 758 Gene3D Phosphatidylinositol (PI) phosphodiesterase 43 346 IPR017946 GO:0006629|GO:0008081
Vian6g00431 758 Gene3D Phosphatidylinositol (PI) phosphodiesterase 362 659 IPR017946 GO:0006629|GO:0008081
Vian6g00431 758 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 42 346 - -
Vian6g00431 758 ProSiteProfiles GP-PDE domain profile. 44 347 IPR030395 GO:0006629|GO:0008081
Vian6g00431 758 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 361 660 - -
Vian6g00431 758 ProSiteProfiles GP-PDE domain profile. 363 660 IPR030395 GO:0006629|GO:0008081
Vian6g00431 758 SUPERFAMILY PLC-like phosphodiesterases 363 660 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00431 Vian-Chr6 18190524 18213585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00431 5 758 Receptor kinase-like Gene Family AT4G26690 49.347 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00431 - - vum:124845829 1359.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00431 6 18190524 18213585 Vian6g00431 6 18190524 18213585 ECH