Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00380 ATGGAGGATAATAACTATAACAGGCAGAGGAGTGGAATATGGAGATGCTTGAGAGATGGAGACTTTGAAGAAGAGGAAGTTTGGGCTGTTTTCAAGGACAGACCTGATTACAACAATATTTCTGGTGTTCACAAGCCAAAGGAAAAAGGGTCTTCTCCTCTTGCTGTTCCCAGGACTCTTCCAAGCGCTGCAAGGATGATTCCAAGGACTAGCAGTGGCAATAGCAGTGCCAGTTCCTCTCATGAAACCAAAGTTCTTCAGCAATCAGCACCTCTCAACATTCCTGACTGGTCACAGATTTATAGGAACAAGCCAAACAAGACCCCCAACAGTGTATCAAAGTTTGGTGACTACGGTGATTTCTACCATTCTATTGGTGGTGAAGGTGATGATGGTGATGGTGAGGGTGTTGGTAATTATGGTGGAGGGTACAGTGATGATGAGGAAGAAGAAGAAGATGAGTATGACACAAAGCTCCCCCCACATGAGTTTATTGCAAGAAGGCTTGCAAGGAGTCAAATATCCTCTTTTTCAGTTTTTGAAGGTGTTGGAAGGACCCTCAAAGGTAGGGATCTCAGCAAAGTGAGGAATGCTGTTCTCACAAAAACTGGTTTCCTTGAATCATTGTGA 630 0.4397 MEDNNYNRQRSGIWRCLRDGDFEEEEVWAVFKDRPDYNNISGVHKPKEKGSSPLAVPRTLPSAARMIPRTSSGNSSASSSHETKVLQQSAPLNIPDWSQIYRNKPNKTPNSVSKFGDYGDFYHSIGGEGDDGDGEGVGNYGGGYSDDEEEEEDEYDTKLPPHEFIARRLARSQISSFSVFEGVGRTLKGRDLSKVRNAVLTKTGFLESL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00380 209 MobiDBLite consensus disorder prediction 65 89 - -
Vian6g00380 209 MobiDBLite consensus disorder prediction 41 89 - -
Vian6g00380 209 MobiDBLite consensus disorder prediction 123 157 - -
Vian6g00380 209 Pfam Senescence regulator 21 207 IPR007608 -
Vian6g00380 209 PANTHER EXPRESSED PROTEIN 17 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00380 Vian-Chr6 16614099 16614728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00380 - - gmx:100788195 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00380 6 16614099 16614728 Vian7g01202 7 20281399 20281992 ECH
Vian6g00380 6 16614099 16614728 Vian6g00380 6 16614099 16614728 ECH
Vian6g00380 6 16614099 16614728 Vian7g01202 7 20281399 20281992 PCT