Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00375 ATGGTGAAGGGCTTGCACGGCCAGAACCTCCCTGCCGACGTGGCGCAGGTGGTTGATCAGCTGGAGCGCCACTGCTTCGCTCCCGATGGATCTCTCATCTCCAAGCCTCTCTTCAACGATCTCCAACTCGCCAGAGAGGAAATGTGCAGGGAAAGACTGCGTTACCTGGAAGCCATGGCGATATATTCTGAAGCAATTGCAATGGTGGAAGAGTATCAACAAGCCATTTCTGTATCTAACCTTGGCGGAATTAGAGATACCGGCAACCTTTACCCACAGCTGGGGTTGAGGAACACTCCTCAGGTTTATCAGACTCTAGAGCATCAAATGGTTGTTGCTGAAGCAGCTCAACGATTGAGACTACCTCTTATCTCCAAAGATGGGGAAGTTCATGATGAGGACATTGAAAAGCTAAGTGTAGTGTCTCGAAGCTCCCTTGACAGTACTGTTAGTGGGGCCAACTCTTCTAATTATAACACTCCAAACAGCTCTGTTAGTGGGACTAATTCTGCTCTTGTTGCTTCGGATCCAGTGGAGCCTGGTGTTGGTGGTGTTCCAAATCGGTTTTTGGGAATTACGCCTGCTTATTTGTGGCAAACTCAACGCCAGAAAACACCGTTATCTGTGGATATGACTGAATATCGCTTGTCTGTTTCACGGGAGGTAGATGCTCGCTTGAAAATGAAATGTGAAAAGTTATCAGACGCATTTTTATTGGATGATAATGATTCTTCATCGTCTGCAAGTCAAAGTTCAAGTTCTCGACTTCCAGAAAGGGTGAAATTGTTGATTGAGGAGATTGAAAGAGAGGAAACAGCACTGCGTGATGACCTATATTCTGCAGATAGAAAGTTTGCCGAATATTACAATGTCTTGGAGCAGATACTTGCAGTGCTTATTAAACTTGTCAAAGATTTGAAGTTGGAGCATCAACACAAATACGATGACTTGCAAAAGACTTGGCTCTGTAAAAGATGTGAGACCATGAGTGCTAAATTGAGGGTTCTAGAACACGTTCTCCTGCTTGAAACTTACACTAAGGAATCCATACCTGCCCTTCATAAGATAAGGAAATATCTTGTTGAGGCAACTGAAGAAGCTTCTATTGCATATAACAAAGCGGTTACCCGGCTGCGCGAGTACCAGGGTGTTGATCCTCACTTTGATAATATTGCAAGGCAGTACCATGACATTGTGCAGAAATTGGAGAACATGCAATGGACAATCCACCAAGTTGAAATGGATTTGAAACGTTTGCCAGATAAACCTAGCACATAG 1278 0.4437 MVKGLHGQNLPADVAQVVDQLERHCFAPDGSLISKPLFNDLQLAREEMCRERLRYLEAMAIYSEAIAMVEEYQQAISVSNLGGIRDTGNLYPQLGLRNTPQVYQTLEHQMVVAEAAQRLRLPLISKDGEVHDEDIEKLSVVSRSSLDSTVSGANSSNYNTPNSSVSGTNSALVASDPVEPGVGGVPNRFLGITPAYLWQTQRQKTPLSVDMTEYRLSVSREVDARLKMKCEKLSDAFLLDDNDSSSSASQSSSSRLPERVKLLIEEIEREETALRDDLYSADRKFAEYYNVLEQILAVLIKLVKDLKLEHQHKYDDLQKTWLCKRCETMSAKLRVLEHVLLLETYTKESIPALHKIRKYLVEATEEASIAYNKAVTRLREYQGVDPHFDNIARQYHDIVQKLENMQWTIHQVEMDLKRLPDKPST 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00375 425 Pfam HAUS augmin-like complex subunit 4 178 414 IPR029327 GO:0051225|GO:0070652
Vian6g00375 425 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 7 417 IPR029327 GO:0051225|GO:0070652
Vian6g00375 425 MobiDBLite consensus disorder prediction 147 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00375 Vian-Chr6 16341501 16361277 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00375 K16587 - gmx:100790889 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00375 6 16341501 16361277 Vian6g00375 6 16341501 16361277 ECH