Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00118 ATGGACGAAGCAGTTGAATGCTGCATTTGGGGCTGTCTTTCTTTGGCTGATTTGCTTGATTTACTTCACCCAGATCTGAATTCTGACCGTTTCGTTTTGGTTTACTTAAAATGGGGTTTTAGGTCTTTTGTGTGGACAGCGATTTCCTACCAGCTTAAAGATAATCTGAAGTTGTCACCTTCAGCTTCCCAATTTGTGTTTTCAGTAGCGTTTTTTCCATGGAGCATTAAACCGTTATATGGAATACTCTCTGATTGCATTCCAATTAAAGGAAGAAAACGGAGTCCCTACTTAGTGATTGCTACTGTGCTTTCCCTAGTGCCATGGTTGGTTTTAGGCTTAAATTCAACCTTGAGGGATTCAACATGGCACCTGATGGTATTGTTGACTGCACAAAACTTGGGCTCAGCCATGGCGGATGTTGTTGTTGATGCAATGATAGCCGAGGCAGTAAGATTTGACCGGGCCTCCTTTGGAGGAGATCTCCAGTCAATATCATGGTTTTCTATGGCTTTGGGAGGAATATGTGGGAGTTTGTTAGGAGGATATGCATTATCCAATTTGCGAATAGATGCTATTTTTCTTCTATTCTGTGTGCTACCATGCATACAGTTATTATCATGCTGTTTTGTGGATGAGAACTCACTAAATAGGAAAATTTCACAAGAGGATTCAACTGTAACAGATTCACATATGAATATTCTAGATGAAGGTAGTCCTTTAACAAAAACGTCCCACAGCAGCACAAGAAGAAGAAAGAAGGGCAAAAAGAACGCAAAGGGGAGATCAGTAAATAGCAGAAATTCAAGGACTTTGAAGAAAGAGGACTCCCTGGTATCAAAGTGGTTCCATTCTTTGAAAGAAGCTATTTATGATTTGTGTCGTGCATTTAGACAGCCAATGATTTGGAGACCTATGTCTTGGTTTTTCCTTGCTCACATTACCATTCCGGATCTTTCAACTGTCATCTTCTACTTTGATACGGAGGTTTTAAAGTTAGAAGCATCTTTCCTTGGGACTGCAAAGGTTGTTGGTTGGTTGGGACTTATGCTGGGAACCTTCATCTATAATCGTTTCCTAAAGTATGCCCATATTGGGTTGGCCTTCTTGAGTCTTCTGCAGATTGTGGTAGTTTCTAGGAAAAATATTGCCTTTGGCATCTCAGACAAGATTATGGTGCTTTTTGGCTCAGCTCTTGTGGATGGAATCAATCAATTCAAGTTTATGCCTTTCTTGATCTTATCTGGACAACTATGTCCTCCAGGAATTGAAGGGACTTTATTTGCCCTTTTCATGTCAATAAACAACTTGGGAACCACACTAGGGTCTTTCTTGGGTGCTGGTTTGGCTTCTGTGTTGAACATTGATTCAGGATCATTTGACAATCTTCTCTTGGGCATCATAATTCGTGCCTTGTGCAATTTCATCCCAGTTGCTTTTCTGTTTCTGATACCAAAGGAAGCTACTGGTTCATCAACATAG 1482 0.4055 MDEAVECCIWGCLSLADLLDLLHPDLNSDRFVLVYLKWGFRSFVWTAISYQLKDNLKLSPSASQFVFSVAFFPWSIKPLYGILSDCIPIKGRKRSPYLVIATVLSLVPWLVLGLNSTLRDSTWHLMVLLTAQNLGSAMADVVVDAMIAEAVRFDRASFGGDLQSISWFSMALGGICGSLLGGYALSNLRIDAIFLLFCVLPCIQLLSCCFVDENSLNRKISQEDSTVTDSHMNILDEGSPLTKTSHSSTRRRKKGKKNAKGRSVNSRNSRTLKKEDSLVSKWFHSLKEAIYDLCRAFRQPMIWRPMSWFFLAHITIPDLSTVIFYFDTEVLKLEASFLGTAKVVGWLGLMLGTFIYNRFLKYAHIGLAFLSLLQIVVVSRKNIAFGISDKIMVLFGSALVDGINQFKFMPFLILSGQLCPPGIEGTLFALFMSINNLGTTLGSFLGAGLASVLNIDSGSFDNLLLGIIIRALCNFIPVAFLFLIPKEATGSST 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00118 493 CDD MFS_FBT 30 482 - -
Vian6g00118 493 Gene3D MFS general substrate transporter like domains 31 483 IPR036259 -
Vian6g00118 493 NCBIfam folate/biopterin family MFS transporter 23 486 IPR004324 GO:0016020
Vian6g00118 493 MobiDBLite consensus disorder prediction 232 272 - -
Vian6g00118 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 32 489 IPR039309 -
Vian6g00118 493 SUPERFAMILY MFS general substrate transporter 36 487 IPR036259 -
Vian6g00118 493 MobiDBLite consensus disorder prediction 246 263 - -
Vian6g00118 493 Pfam BT1 family 39 487 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00118 Vian-Chr6 3218107 3222687 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00118 - - gmx:100781251 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00118 6 3218107 3222687 Vian6g00118 6 3218107 3222687 ECH