Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01899 ATGAGTGAGAGTAACGGGAACAGTAGGAAGCCAAATGTTGAAGATCAAGATCTGGGACTGTATTTCTTGGAAGCGTGCAGGGGAAGGGAGATGAGAGAGAGGGAGAAGGAGAAGGAGAAAGAGGAAGAGGAGGAAGAGGAGGAGGCGCCGAGGGAGCTCAACACAATTAACAGCTCCGGTGGCTTCGTGGTGGTGTCAACGGACAAGCTGTCGGTGAAGTACACCAACGTCAACCTTCACGGCCACGATGTCGGCGTCATTCAGGCCAACAAGCCTTCTCCTACCAAGCGCCTCATCTACTATTTCGAGATTCATGTCAAGGATGCCGGCGTCAAGGGTCAAATTTCCATTGGCTTCACCTCCGAGACATTCAAGATGCGAAGGCAGCCAGGGTCAGTCACTCACTCGCTCACTCACTCACTCACTGATCCACTGCTTCACTTTTTTAACCCTAACCCTAACCCCAATCCCGGGGAAGCGTTTGGTCCAACCTATACGTCTGGTGATGTAGTTGGTGCCGGAATTAACTACGCTGCGCAGGAATTCTTTTTCACTAAAAATGGCCAAGTTGTCGGCTCTGTTTACAAAGACTTGAAAGGCCCCCTTTTTCCTACTATAGCAGTTCATAGCCAAAATGAGGAGGTGCATGTTAACTTTGGGCAGAAACCATTTACTTTCGACTTAAAAGAATTTGAAGCACAAGAAAGAATGAAGCAGCAACTGAAAATAGAGGAAATTTCTGTGCCACCAAATGTCAGTTACGGGAAGTACTGGTCTTCACTAGTTGCACACTGCTGGTTTAGGAAGGTTGAGATTAATCTGTTTAACCCTAGCAGAATTGTCCGCTCCTACCTGCTGCACTATGGCTATGAAGATACATTGAATTCATTTGATGTGGCTAGTAAAAGTACTGTTCCTCCTATACACATAGCTCAAGAAAGTGGAATTGATGAGCAGGAAATAACATATGCGTTAAATCATAGAAAGACCCTTCGGCAGTGTCATATGCTTCCCTACTTAAAGAAAGCTATTGCTGTTGGCCATGGTAGTTGA 1053 0.4625 MSESNGNSRKPNVEDQDLGLYFLEACRGREMREREKEKEKEEEEEEEEAPRELNTINSSGGFVVVSTDKLSVKYTNVNLHGHDVGVIQANKPSPTKRLIYYFEIHVKDAGVKGQISIGFTSETFKMRRQPGSVTHSLTHSLTDPLLHFFNPNPNPNPGEAFGPTYTSGDVVGAGINYAAQEFFFTKNGQVVGSVYKDLKGPLFPTIAVHSQNEEVHVNFGQKPFTFDLKEFEAQERMKQQLKIEEISVPPNVSYGKYWSSLVAHCWFRKVEINLFNPSRIVRSYLLHYGYEDTLNSFDVASKSTVPPIHIAQESGIDEQEITYALNHRKTLRQCHMLPYLKKAIAVGHGS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01899 350 Pfam SPRY domain 99 221 IPR003877 GO:0005515
Vian5g01899 350 SMART SPRY_3 97 223 IPR003877 GO:0005515
Vian5g01899 350 CDD SPRY_RanBP_like 85 220 IPR044736 -
Vian5g01899 350 Coils Coil 26 49 - -
Vian5g01899 350 Gene3D - 26 240 IPR043136 -
Vian5g01899 350 MobiDBLite consensus disorder prediction 31 55 - -
Vian5g01899 350 ProSiteProfiles B30.2/SPRY domain profile. 31 224 IPR001870 -
Vian5g01899 350 SUPERFAMILY Concanavalin A-like lectins/glucanases 57 226 IPR013320 -
Vian5g01899 350 PANTHER RAN BINDING PROTEIN 9-RELATED 50 301 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01899 K23334 - gmx:100797084 489.96