Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01896 ATGACGAAATCAGGATCAACCCCTGTCACTGCCTCTGCAAAGGTTCACCCTTCCAACGATCCCGAACTGGACCCGGACTCTTACGCCCTCGAGAAGTTCAGACTCTACGAAACCAGAGCGAGGTTCTACCTGATCGGAAGTGATCGGAGCAAAAGGTTCTTCCGAGTGTTGAAAATCGATCGATCAGAGCCGTCGGATCTGAATATCAGCCAAGACCCCGTCCTGTATTCACCCCAGGAGATCAAGAGCTTGCTTCAGCGGATTGCTGAGGGTAACAGAGCCACTGGCGGCCTCACTTTCGTCGCTAAGGTTTTCGGAATTGCTGGCTGCATCAAGTTTCTCGAGTCTTACTACTTGATTCTCGTTACTAAACGTAGACAGATTGGTGCTATATGTGGCCATGCAATCTATAGCATCAAGGAGAGCCAATTGATAACCATCCCACATGTTTCAATCCAATCTGATTTAGCTCACTCTAAGACTGAGCTCAGGTACAAAAAGCTTTTGTCTAGTGTCGATTTGACCAAGGATTTTTTCTATAGTTACACTTACCCTATAATGCAAAGTTTGCAAAAGAACGTTTCTCCTAGCGAAGACGGAGGGATGTCGTATGATAATATATTTGTTTGGAATGCATATTTGACACAAGCAATCAGGTCAAGATGCAATAACACTATTTGGACCATAGCTTTAGTTCATGGTCATTTTAGGCAGAGTCGTCTATCAATTTTTGGAAGAGACTTCAGTGTTTCCCTGATTTCTAGACGATCTAGACATTTTGCAGGGACACGTTACTTGAAAAGGGGTGTTAATGATCGGGGGAGGGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTTGATGAAGAAGCTGGCTCTTGCAAGGGGAAAATGAGTTCAGTTGTGCAAATGCGTGGATCAATACCACTTTTTTGGTCACAAGAAGCATCAAGATTTAGCCCTAAGCCTGACATAATTTTGCAGAGGTATGATCCGACATACGAAGCAACTAAATTGCATTTTGAAGACCTTGCTAAGAGATATGGCAATCCAATTATTGTTCTGAATCTGATTAAGACAGTTGAGAAAAGGCCTCGAGAAATGATGCTGAGACGTGAATTTGCAAGTGCTGTTGGTTATCTTAACCAAATTCTACCAGTAGAGAACCATCTTAGATTTATTCACTGGGACTTTCACAAATTTGCAAAAAGCAAGTCGGCCAATGTTTTATTAGTTTTAGGAGCTGTAGCAAGTGAAGCGCTTGATTTAACTGGTATTTACTACAGTGGTAAACCCAGTATAATAAAGAGGGCCAACAAGAGTAATCGAACTAGCACAGGAAGGGATGCTTCACTGAGAGATCTGAGAGCTAGTTCTGGTGATATTGTGAGGATTGGGAACAGTAATGAAATGATAAACTCTGTGGTTAACCGAGACAAAGAGACTGACACTAACCATCAGAATAAAAAAGATAATTTTAGTAGTGATGCACCACATTTTCAGAGTGGAGTTCTTCGTACCAACTGCATTGACTGCTTGGACCGTACAAATGTTGCCCAGTATGCATATGGTCTTCAAGCTTTAGGACGCCAGCTCCATGCAATGGGTTTGACTGATGTGCCCAAAGTGGATCCTGATAGTAGTATCGCTGCAGCTCTAATGGATATGTATCAAAGCATGGGGGATGCTCTTGCTCAGCAGTATGGTGGTTCAGCAGCTCACAATACTGTGTTTCCGGAGAGGCAGGGAAAGTGGAAAGCAACAACACAATCAAGAGAGTTTTTGAAGTCCATAAAACGATATTATAGCAATGCTTACACAGATGGTGAAAAGCAAGATGCAATAAACTTATTTTTAGGTTACTTCCAACCACATGAAGGGAAACCTGCTCTGTGGGAGCTGGATTCAGATTATTATCTCCATGTATCTGGGGTTGGGGATGATCTAATTCCTGAGAAGTGTTCTGAACCGAATCCTAAGCCTTCTGAAAGTGGTGGAATAGTATTCAGCCCAATACCCGCTTGCAGAGAAGACTTTTTACGGATAAAGTTGACATCGTTTGACAAGTTAATTGAGAAGACCTGTAGTACAATTAAAAATGTAAGACTATGCTCTGAACCTGATCAAAGACCAGGTGGGAGTTCTGGAAACAGTGGAGTGGCACCTGATGCAGCTGAGATACAGCTAAAAAGCCCGAATTGGCTTTTTGGCCAGAGAAAGTACGAAGAGGGTTCCTCTGCTGCAAAAGTAGCTTCTTATGAAACTGACGTTGAAGGATCTCATGCTAATGGATTTTGTGACTTGAATTGGCTTTCTTCAGGCAGTGATATGAATGAAGAGGATGTTTTCCAAAGGTACCTTGCAATGACCTCAGCAAATGAGGCGAATGGGTGGTATGGAGGTAGTCTCCTCGGCGATCAAGATGAAAGCAGTGAGATATATAAACATTATGCCGAGCTATGTCAGGGACCTGCCCTGGAACTTTTCCAAAATGACTCTGAGAGGGAGCAACACTACGCAGATGCTTTAAGCACGAGTTCATATGAAATTGTTAATGATACTAGCGTTGCGACAGAAATGGAAGCAGCTCTAAAGGAGTATGACCAAGTTGGTGCGGACCTTGGGATCATTCCCAGATCTTGTAAATTCTTTGCCGATGATCCGAGTTGGCTTACAAGATGGTTAACTGGGGAAGAAAAACTACAAAGGATATGA 2715 0.428 MTKSGSTPVTASAKVHPSNDPELDPDSYALEKFRLYETRARFYLIGSDRSKRFFRVLKIDRSEPSDLNISQDPVLYSPQEIKSLLQRIAEGNRATGGLTFVAKVFGIAGCIKFLESYYLILVTKRRQIGAICGHAIYSIKESQLITIPHVSIQSDLAHSKTELRYKKLLSSVDLTKDFFYSYTYPIMQSLQKNVSPSEDGGMSYDNIFVWNAYLTQAIRSRCNNTIWTIALVHGHFRQSRLSIFGRDFSVSLISRRSRHFAGTRYLKRGVNDRGRVANDVETEQIVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYEATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFASAVGYLNQILPVENHLRFIHWDFHKFAKSKSANVLLVLGAVASEALDLTGIYYSGKPSIIKRANKSNRTSTGRDASLRDLRASSGDIVRIGNSNEMINSVVNRDKETDTNHQNKKDNFSSDAPHFQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLTDVPKVDPDSSIAAALMDMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPHEGKPALWELDSDYYLHVSGVGDDLIPEKCSEPNPKPSESGGIVFSPIPACREDFLRIKLTSFDKLIEKTCSTIKNVRLCSEPDQRPGGSSGNSGVAPDAAEIQLKSPNWLFGQRKYEEGSSAAKVASYETDVEGSHANGFCDLNWLSSGSDMNEEDVFQRYLAMTSANEANGWYGGSLLGDQDESSEIYKHYAELCQGPALELFQNDSEREQHYADALSTSSYEIVNDTSVATEMEAALKEYDQVGADLGIIPRSCKFFADDPSWLTRWLTGEEKLQRI 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01896 904 ProSiteProfiles Sac phosphatase domain profile. 169 570 IPR002013 GO:0016791
Vian5g01896 904 MobiDBLite consensus disorder prediction 1 23 - -
Vian5g01896 904 Pfam SacI homology domain 105 401 IPR002013 GO:0016791
Vian5g01896 904 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 21 847 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01896 Vian-Chr5 40947996 40964054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01896 6 904 Acyl Lipid Metabolism Gene Families AT1G22620 74.972 0.0 1433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01896 K22913 - gmx:100800092 1700.64