Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01891 ATGAACATGCTGGTGGTAGAGGTTGTGGATGCAAGCGACCTCATGCCCAAAGACGGGGAGGGCTCAGCCAACCCCTTTGTGGAGGTGAAGTTTGATGAGCAGCAGCATACTACTGAGACAAAGCACAAAGACCTCAATCCTTATTGGAACCAGAAGCTGGTGTTCCACATCGATAACCCGAGAGATCTTGCGTACAAGACAATTGAAGTGGTTGTATACAATCGTAATGATCGGAACCACAACAATTTCCTTGGAAGGGTCAGACTTTCCGGCTCTTCCATCCCTCTGTCGGAGTCCCAGGCCCGTGTTGAACGCTACCCACTTGAGAAACGTGGCCTCTTTTCAAACATCAGGGGCGATATTGCTCTCAAGTGTTATGCGCTGCATGATCCTCTTCCTTCTCATCCTCCACCGCAACCTCAGGACGCCGGCGGCGATCCTGCTGCTGCTTCTGAACAGCATCGTCCTCCTCCCCCTGCCCCGGCGGAGGAGGATCAGCACACTCCCTTGCAAGAAATAAACCCCAACATGGTGGCGGAGGAGGAAAGCGTGAACAGTGAAAGGGAGGAAAAGAAAAAGAAGAAGATGAAAAAGAAAGAAAAGGAAGTGAGGACTTTTCACTCTATACCTGCTGCGGCTGCTGCAGCGAAGGCACAGTTCCAGTCACAGTCCCAGGCGGCAGCGGAAACGGTGAGGAGGGCTGACTTCGCAAAGGCTGGACCACCGAACGTGATGTTGATGCAGATCCCAAAGCAAAACCCCGAGTATGGACTGGTGGAGACAAGTCCTCCTCTGGCGGCTCGCTTGCGGTACAGAGGAGGGGACAAGATATCAACCACCTACGACTTGGTGGAACAGATGCATTACTTGAGAAGCAAAGCCAATTTTCACCGCATAATGTCAATCCTCAGAGGAGTTACAGCAGTTTGCAAATGGTTTGATGACATCTGCACCTGGAGAAACCCAATCACAACCTGTCTTGTTCACGTCCTGTTCTTGATACTGGTTTGCTACCCGGAACTGATATTGCCCACCATTTTCCTTTACTTGTTTGTAATTGGGATTTGGAATTACCGGTTCAGGCCAAGGCAACCACCCCACATGGATGCCAGGTTGTCACAGGCAGAAACTGCCCACCCAGATGAACTGGACGAGGAATTTGACACTTTTCCATCCACAAAACCTTCAGATATTGTGAGAATGAGGTATGACAGATTGCGGAGTGTGGCGGGTAGAGTACAGACTGTGGTTGGAGATCTGGCTACTCAGGGAGAAAGAGCTCAAGCCATACTAAATTGGAGAGACTCGCGGGCAACATCTATCTTTATCATCTTCTCGCTCATATGGGCCGTATTCATTTACATTACTCCCTTTCAGGTGGTGGCAATTCTCGTAGGCCTATATATGCTACGTCATCCTCGGTTTAGGAGCAAGATGCCTTCAGTACCAATCAATTTCTTCAAGAGATTGCCTTCCAGATCAGACACGCTTATATGA 1497 0.497 MNMLVVEVVDASDLMPKDGEGSANPFVEVKFDEQQHTTETKHKDLNPYWNQKLVFHIDNPRDLAYKTIEVVVYNRNDRNHNNFLGRVRLSGSSIPLSESQARVERYPLEKRGLFSNIRGDIALKCYALHDPLPSHPPPQPQDAGGDPAAASEQHRPPPPAPAEEDQHTPLQEINPNMVAEEESVNSEREEKKKKKMKKKEKEVRTFHSIPAAAAAAKAQFQSQSQAAAETVRRADFAKAGPPNVMLMQIPKQNPEYGLVETSPPLAARLRYRGGDKISTTYDLVEQMHYLRSKANFHRIMSILRGVTAVCKWFDDICTWRNPITTCLVHVLFLILVCYPELILPTIFLYLFVIGIWNYRFRPRQPPHMDARLSQAETAHPDELDEEFDTFPSTKPSDIVRMRYDRLRSVAGRVQTVVGDLATQGERAQAILNWRDSRATSIFIIFSLIWAVFIYITPFQVVAILVGLYMLRHPRFRSKMPSVPINFFKRLPSRSDTLI 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01891 498 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
Vian5g01891 498 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 291 497 IPR047259 -
Vian5g01891 498 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 140 IPR035892 -
Vian5g01891 498 CDD C2A_MCTP_PRT_plant 4 128 - -
Vian5g01891 498 MobiDBLite consensus disorder prediction 129 205 - -
Vian5g01891 498 Pfam C2 domain 4 104 IPR000008 -
Vian5g01891 498 Gene3D C2 domain 1 130 IPR035892 -
Vian5g01891 498 Pfam Plant phosphoribosyltransferase C-terminal 343 497 IPR013583 -
Vian5g01891 498 Coils Coil 179 204 - -
Vian5g01891 498 SMART C2_3c 3 108 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01891 Vian-Chr5 40909426 40912494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01891 291 498 Lipid Metabolism Gene Families AT1G22610 82.212 1.18e-125 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01891 - - gmx:100777852 414.075