Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01890 ATGCCACTTAAAACGGAACAACCAATCCCAAAACACACCAACCAACAACTTCCGACAACAATAATGTTGAATGTTTTCGCAGTGAGTCTGGTAATCACTTCACTGGCCGCATCGGCCATACTGTCTCCCGCTCCAGCCACGCACCAGAAGCAGGGAGCCAACACCATTGTCAGAGAAGGCCATAGAGTTGTGGTTGTTGAATACGACCAAGATGGCCATCACAACACCAAAATCTCAATCTCCCCAGAGCAACCCACACATCACCACCAAGTTTTCGACAACGCCAAAGACGGGATCCGAGAGGCTGCCTCCGTTCTCCCTAACGTCGGTCAAGGCATTTCACAACCGGAAGATGCGGCTTTTCTGCATGCCCCTAAGGAGCTCGTTTGCGATGCCTACGGAAGATGCAAGCAAAGAATCGCGGATGCCATGGAGAAGACCAAGGATAAGGCTCAAGAGGCCCTCCAGAAGAAGAAGGAGAAGGTTGCCGCCAACAAGGAGGCGGCGCGGCGAGTGGGTGATAGTGTTGCCGATGCACTTGGAAAAACAAAGGAAAGCGTGCATGATAAAGCCCGTGATGTGCACGAATACGCGCAGGACACTGTAGAAACAGCGAAGGAGCATGTGGCTCATAACATCTCAGAGGCCAGGGATTCTTTGCGCCGCCTCAAACACGCATTAAAAAGCAGTTTTGGATCGTTGGAGAGCCTTAATTCGGTGATGGGGGTGGCCAACTTGCTGGGGTTTGCCACTGCTTATGGGATGTGTGTGTGGGTTACGTTTATCTCCAGCTACGTGCAGTCGAGGGCCATGGCGAGGCACCAGTTCGCAGTGGTGCAGAGCAAAATCTACCCTGTTTATTTCAGGGCCATGGCTTATAGCGTTGGGGTGGCTCTAGTTGGTCATGTCTTCGGTAATACAAACACTCTGCTCTCCAACAAATCTCACGCATTGCAAGCATATAACCTTCTCGCCTCTCTGGCCACTCTTTTCTTCAATTCTCTTTACTTGGAGCCTCGGGCCACCAAGCTGATGTTCGAAAGGATAAAAATAGAAAAGGAAGAAGGAAGAGGCAGAGTAGATATAAGTGGTGAGCGTGGCAGAACAGAGCATCAACGCACAGGTGAGCCTTCCAGCAGCGCAGATCAGGATGCAGTGAGATCAAGAATAATCAAGCTCAACGACAAGCTCAAGAAATTGAATTCCTATTCCTCTCTCCTAAACATCCTCAATCTCATGTCTCTCACATGGCATCTCGTTTATTTGGCTCAACGGCTTCACACCCCTTGCTAA 1293 0.5012 MPLKTEQPIPKHTNQQLPTTIMLNVFAVSLVITSLAASAILSPAPATHQKQGANTIVREGHRVVVVEYDQDGHHNTKISISPEQPTHHHQVFDNAKDGIREAASVLPNVGQGISQPEDAAFLHAPKELVCDAYGRCKQRIADAMEKTKDKAQEALQKKKEKVAANKEAARRVGDSVADALGKTKESVHDKARDVHEYAQDTVETAKEHVAHNISEARDSLRRLKHALKSSFGSLESLNSVMGVANLLGFATAYGMCVWVTFISSYVQSRAMARHQFAVVQSKIYPVYFRAMAYSVGVALVGHVFGNTNTLLSNKSHALQAYNLLASLATLFFNSLYLEPRATKLMFERIKIEKEEGRGRVDISGERGRTEHQRTGEPSSSADQDAVRSRIIKLNDKLKKLNSYSSLLNILNLMSLTWHLVYLAQRLHTPC 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01890 430 MobiDBLite consensus disorder prediction 360 377 - -
Vian5g01890 430 Coils Coil 137 172 - -
Vian5g01890 430 Gene3D - 165 232 - -
Vian5g01890 430 MobiDBLite consensus disorder prediction 360 383 - -
Vian5g01890 430 Pfam Domain of unknown function (DUF4149) 248 348 IPR025423 -
Vian5g01890 430 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44 166 427 - -
Vian5g01890 430 SUPERFAMILY Apolipoprotein A-I 135 233 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01890 - - lja:Lj3g3v3754400.1 437.958