Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01884 ATGACAACAGCGACGACAACAACCACTCCCAATCTCATGAATGCGCTTCAGTACGACGCCTATGGCGGAGGCCCCGCCGGCCTGAAGCACGTTCAAGTTGGCGTTCCCACTCCCAAGACAAGTGAGGTTTTGCTGAAATTGGAAGCAGTCAGCATCAACCCCATTGATTGGAAGATTCAGACGGGTGTTCTGCGCGCTCTATTTTTACCCAGAACATTTCCCCACATTCCTTGCACTGATGTAGCTGGAGAAATCGTTGAGATCGGACCGCAAGTCAAAGATTTCAAAGTGGGAGACAAAGTCCTTGCCAAACTCACTCATCAATATGGAGGTGGACTGGCTGAGTTTGCTGTGGCTAGTGAGAGCTTAACAGCTTCCAGACCACCTGAAGTCTCAGCTGCTGAAGCTGCAGCATTACCTATTGCCGCACTCACAGCTCGTGATGCTCTCATTCAACTTGCAGAAGTCAAGCTTGATGGAACTGGCCAGCCCAAGAACATTTTAGTAACTGCTGCTTCAGGTGGTGTAGGTCACTATGCTGTTCAACTAGCAAAGCTAGGGAACACCCATGTCACAGCCACTTGTGGGGCTCGCAACATTGAGTTTGTTAAGGGCTTAGGTGCCGATGAGGTTCTTGACTACAGGACTCCGGAGGGGGCAGCACTCAAGAGTCCATCTGGTAGAAAATATGATGCAGTCATACACTGTACGACAGGAATACCTTGGTCAACTTTTGAGCCTAATTTGGCTGAAAAGGGCGTTGTAGTTGATTTAACACCTAATGCAAGTTCGTTGTGGACTGCTGCTCTGAAGAAAGTTACTTTTGCCAAGAAGCGGCTGGTGCCATTTGTTGTAACTGTCCAGCGTGAGGGCCTGGAACATCTACTCCAATTACTGAAGGATGGGAAACTTAAGTCTGTTATTGACTCCAAGTTTCCTTTGAGCAAAGCTGAAGATGCTTGGGCTAAGAGCATTGATGGCCATGCTACTGGAAAAATCATTGTGGAACCATAG 1014 0.4822 MTTATTTTTPNLMNALQYDAYGGGPAGLKHVQVGVPTPKTSEVLLKLEAVSINPIDWKIQTGVLRALFLPRTFPHIPCTDVAGEIVEIGPQVKDFKVGDKVLAKLTHQYGGGLAEFAVASESLTASRPPEVSAAEAAALPIAALTARDALIQLAEVKLDGTGQPKNILVTAASGGVGHYAVQLAKLGNTHVTATCGARNIEFVKGLGADEVLDYRTPEGAALKSPSGRKYDAVIHCTTGIPWSTFEPNLAEKGVVVDLTPNASSLWTAALKKVTFAKKRLVPFVVTVQREGLEHLLQLLKDGKLKSVIDSKFPLSKAEDAWAKSIDGHATGKIIVEP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01884 337 Pfam Alcohol dehydrogenase GroES-like domain 41 107 IPR013154 -
Vian5g01884 337 Gene3D - 150 288 - -
Vian5g01884 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 287 IPR036291 -
Vian5g01884 337 SUPERFAMILY GroES-like 10 155 IPR011032 -
Vian5g01884 337 Gene3D - 20 335 - -
Vian5g01884 337 SMART PKS_ER_names_mod 23 335 IPR020843 GO:0016491
Vian5g01884 337 Pfam Zinc-binding dehydrogenase 206 335 - -
Vian5g01884 337 CDD MDR1 17 335 - -
Vian5g01884 337 PANTHER ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE PROTEIN C16A3.02C 11 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01884 Vian-Chr5 40877332 40879431 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01884 K00224 - gmx:100790762 560.836