Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01877 ATGTCTGAAGAGCTTATGGAGTTGTCACCAGAGAATTCATCAGTCCCAGGATTCAAGGAAGAGTCTTCTGAACATTCGCCATCTGAGAAGTGGTTAAAAACCAGCAAAATTACTCCATTTATACAACTTGATATTCAAGCTGAGTTGATTGAACAAACTAATTCAGACCATCTTGGATATGGCCATAGCCACCACACTCCTGAAGCTGGTGAAAAACATCAGGCCTTAAAATCACATGCAATAACCAATACAGAAAAGACATACACTGTCACCAGAAGAAAAGAAAAGCTATCGAGTGTTCTACTTCCACTGTCTGCAGCTTCGTACTATAGTGGAGTATCACCGGAAATGGAAATTGTTGAATCATGTCAAACCATTGAGAAGCTAAACGAATATTTGAAAGCAAAAAAGGATGATGTCAATGCTGGTGTACCAGGCAAATTCTTACGTGCAGTAATGGGTTCAGATGGTGTTGATGTAGGAACTGTGGCTTCAATCATCACGTATTCCTTCTACCTAGATGTAACTTCAGAGAGCGATCAGTTCTGCACAGTACCAATCATTAACATTAACCGGGCAAATCTTGGTTCGCATGTTGAACTCAAGTGGTTGCTTGATTCATGTCATATTGATCAGTCATCCTTAATTTTTGCAGATGAGATTGATTTGGGTTACTATGATCTATTTGGAAGTCTTAAGATCGTGCTGTTGAAGGGAAGCAAGATTAACAGTAAGCAAGAGAAATTGAAGCATGCTGTGGTTGAAAATTTTCACTGCAGAAAGGGTGAGACAATATATCCATGGGTTAAAACTGTCATCACAGGCGAGGAATGCTCTTGTTGCACGGCCATAGCAGACAAATTTGTAAATTATTCGCCTGAAATTTTGGCTGGCAAATCATTCAGTAAACTTCTGCTAGCTGGCATTCTTTTGGATACTGCGAATCTAAGGGACCCTAGCTGCACCTCCAAAGATAAGTACACGGCTTCATTACTGATCAACGGTGCTGGTCGTTATGGATGCAATGGCTTTTACCAATTATTGAAGTACAAAATGCATGACCTTTCCTCCCTCCAAGTAGCAGATATCTTGTGGAAGGACTTCAAAAAGTGGACAGGACAAGAGAGTGGAGATTCAAGGTCACTGCAAATTGGCATGAGTTGCGTAGGACTTTCAATCGGACAGCTTCTTTCTCGCGCAGAAAATCTTGCACAAGAAATAACAAGCTTTCAGTTGTATGAGAAACTTCGAGCACTTATTGTGGTTTCGGGGTACTTTACTGATGAAAAGAACTTCAAGAGAGAAGTTTTGATTTGCACGGAATCTACGAAGCTGTTAGAGAGTTTGCTCTTTTTCTTCGATTTTAATGCTTCCCGGCTGCCACTCAAAGCTTTGCACTTTCCAGGTCTGAAGAATGAGATGAAAGCGTACGAGATCGATAAGGTTACATCAAGAAAAATAGTTGAACATCTCATACAAGAGTTCGTTGGGATACCAAAACCCTAG 1506 0.4057 MSEELMELSPENSSVPGFKEESSEHSPSEKWLKTSKITPFIQLDIQAELIEQTNSDHLGYGHSHHTPEAGEKHQALKSHAITNTEKTYTVTRRKEKLSSVLLPLSAASYYSGVSPEMEIVESCQTIEKLNEYLKAKKDDVNAGVPGKFLRAVMGSDGVDVGTVASIITYSFYLDVTSESDQFCTVPIININRANLGSHVELKWLLDSCHIDQSSLIFADEIDLGYYDLFGSLKIVLLKGSKINSKQEKLKHAVVENFHCRKGETIYPWVKTVITGEECSCCTAIADKFVNYSPEILAGKSFSKLLLAGILLDTANLRDPSCTSKDKYTASLLINGAGRYGCNGFYQLLKYKMHDLSSLQVADILWKDFKKWTGQESGDSRSLQIGMSCVGLSIGQLLSRAENLAQEITSFQLYEKLRALIVVSGYFTDEKNFKREVLICTESTKLLESLLFFFDFNASRLPLKALHFPGLKNEMKAYEIDKVTSRKIVEHLIQEFVGIPKP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01877 501 Pfam DHHA2 domain 348 488 IPR004097 GO:0005737|GO:0016462
Vian5g01877 501 SUPERFAMILY DHH phosphoesterases 162 421 IPR038763 -
Vian5g01877 501 Gene3D DHHA2 domain 354 498 IPR038222 -
Vian5g01877 501 MobiDBLite consensus disorder prediction 1 30 - -
Vian5g01877 501 Gene3D - 123 351 - -
Vian5g01877 501 PANTHER BNIP - RELATED 91 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01877 Vian-Chr5 40809327 40813756 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01877 K01514 - gmx:100802064 809.675