Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01874 ATGGCATCGGCATTTCTGAAATTGGAAAAATTGAGCAGAAGAGGAAGAACATTTAGGTTTGGGCAATGGAATCAGCACTGTTCGAAGCTGAGCTACAGAGCAGCATCAGAGAGTGGAAAAATGGAAGAAGAAGAAGAAGCTCCGAGTTCTGGAATCTCTAGACCTCTCTCTGAAATACTCAAAGAGCTCAACAAGAAAGTCCCTGACTCTCTCGTCAAAACCCGCCATGAGAAAGATGGATTCCCCATCAGATACATTCCCTGGCATACTGTCAACCGTATTTTGAACTTACACGTTCCTGAGTGGTCTGGTGAGGTTCGGAATATCACCTATTCAGCTGATTCAAAGTCTGTCTCCGTCGTTTACCGAGTTACGCTTTATGGGACTGATGCTGAGATATTTAGGGAATCAACTGGTACTGCTTCACTAGACGACACAAATTATGGAGATCCTGTACAAAAAGCTGAAGCAATGGCTTTTAGGAGAGCTTGTGCACGCTTGGGACTGGGGCTCCACCTCTATCATGAAGATGCATCTTAG 540 0.4481 MASAFLKLEKLSRRGRTFRFGQWNQHCSKLSYRAASESGKMEEEEEAPSSGISRPLSEILKELNKKVPDSLVKTRHEKDGFPIRYIPWHTVNRILNLHVPEWSGEVRNITYSADSKSVSVVYRVTLYGTDAEIFRESTGTASLDDTNYGDPVQKAEAMAFRRACARLGLGLHLYHEDAS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01874 179 Gene3D DNA repair protein Rad52/59/22 54 179 IPR042525 -
Vian5g01874 179 PANTHER - 36 177 IPR037489 GO:0000724|GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01874 Vian-Chr5 40791057 40793163 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01874 K26556 - gmx:100782719 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01874 5 40791057 40793163 Vian5g01874 5 40791057 40793163 ECH