Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01871 ATGAGGGGAAAGGCAGCTTCAGGAAAGACAATTTTGTTCGTATGCATTGCATGCTTTCTTGCAGGAACACTCTTTAGTGGCCAGATGTGGACACGACCCTCTAACCATGAAAATACACTGCAATCATCCACACCTGATTGTGATCACAAGCGAAAACTGATTGAAGGAAGATCTGTTGATGTAATGGAGGAAGTGGTGAAGACTCACCAAGCTATCAAGTATCTGGATAAGGCAGTTTCGACGTTGGAAATGGAACTGACAGCAAGTAGGAGAAGCCAGAGTGGTGGGAAGCAAATTCGAAAGCATAATGTACAAAAGGCTTTTGTGGTGATTGGTATTAACACAGCTTTTAGCAGCAAAAGGCGAAGAGACTCTATACGCGAAACATGGTTACCTAGAGGGAATGAGTTGAAGGAACTAGAGAAAGAGAAGGGCATTGTTGTAAGGTTCGTGATCGGGCACAGCAGCACACCAGGAGGAGTTTTGGATAAAGCAATTGATGCAGAAGAGGCAGAACACAAGGACTTCCTGAGGTTAGACCACGTCGAGGGCTATCATGAGCTATCCACCAAGACTCGTCTCTACTTTTCCACCATCACTTCTTTGTGGGATGCTGATTTCTACGTCAAGGTAGACGATGATGTCCACTTAAATCTAGGTATGCTAGTGAGCACACTTGCCAAGTACCGATCAAGACCCAGGGTTTACATTGGTTGCATGAAATCTGGTCCTGTTCTATATCAAAAAGGAGTAAAGTATCACGAAGCTGAGCACTGGAAGTTTGGAGAGGAAGGAAACAAGTACTTCAGGCACGCCACTGGCCAAATATATGCCATTTCCAAGGATCTCGCCACTTATATATCCATCAATTGGCCAATATTGCACAAATATGCCAATGAAGACGTATCTTTAGGTTCCTGGTTACTGGGCCTGGAAGTTGAACATGTGGATGAACGATCCATGTGTTGCGGAACCCCACCAGATTGTGATTGGAAGGCAAGGACAGGGAATGTGTGTGTGGCATCGTTTGATTGGTCATGCAGTGGTATCTGTAAGTCGGTGGAGAGAATGAAAGAGATACACAAAGCTTGCGGAGAGGGACACGGAGTTGTTTGGAACATTGAACTCTGA 1131 0.45 MRGKAASGKTILFVCIACFLAGTLFSGQMWTRPSNHENTLQSSTPDCDHKRKLIEGRSVDVMEEVVKTHQAIKYLDKAVSTLEMELTASRRSQSGGKQIRKHNVQKAFVVIGINTAFSSKRRRDSIRETWLPRGNELKELEKEKGIVVRFVIGHSSTPGGVLDKAIDAEEAEHKDFLRLDHVEGYHELSTKTRLYFSTITSLWDADFYVKVDDDVHLNLGMLVSTLAKYRSRPRVYIGCMKSGPVLYQKGVKYHEAEHWKFGEEGNKYFRHATGQIYAISKDLATYISINWPILHKYANEDVSLGSWLLGLEVEHVDERSMCCGTPPDCDWKARTGNVCVASFDWSCSGICKSVERMKEIHKACGEGHGVVWNIEL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01871 376 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 76 320 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vian5g01871 376 Pfam Domain of unknown function (DUF4094) 7 91 IPR025298 -
Vian5g01871 376 Gene3D - 97 323 - -
Vian5g01871 376 FunFam Hexosyltransferase 101 322 - -
Vian5g01871 376 Pfam Galactosyltransferase 121 317 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01871 Vian-Chr5 40774621 40776377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01871 4 376 Glycosyltransferase AT1G77810 61.880 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01871 K20855 - gmx:100776291 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01871 5 40774621 40776377 Vian5g01871 5 40774621 40776377 ECH