Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01861 ATGTGGAAACTCGCAACCAAATCATCCCGTTTTCTTCCTCTGCTGCTGCAACTTCCTAAACACGACGCTTCGCTTTCTCAAAGATTCACCACTGGATTTCCCTTCCACTCGCCCTTCCAGGAAACGGGTGGGATTTCTCCCAAACAAGTAGCTACAGTTATAACTTTTGTTTTAGGAGGTCCTGGTAGTGGAAAAGGTACGCAATGTGCAAAAATTGTTGAAACCTTTGGATATAAGCATCTGAGTGCTGGAGACCTTTTGAGAAGGGAGATGAGTTCTGATAGTAAATATGGCTCAATGATTCTGAATACAATTAAGGAAGGAAAAATTGTTCCATCAGAAGTTACTGTCAAATTGATTTTAAGAGAGATGAAATCTAGTGACAACCGGAAGTTTCTTATTGATGGTTTCCCTAGAAGCGAGGAGAACCGTATAGCTTTTGAACAAATTATTGGAGCAGAACCACGATTTGTACTTTTCTTTGATTGCCCTGAAGAAGAGATGGTGAAACGTGTGCTTAGCCGTAATGAGGGTCGAGTTGATGACAATATAGATACAATGAGGAATCGTCTTAAAGTGTTTGAAGCTTTGAATCTTCCCGTTATTGATTATTATGCGAAGAAGGGGAAACTTTACAGGATCAATGCAGTGGGAACAGCGGATGAAATATTTAAGCAAGTTCGGCCAGTTTTTGAGGCTTGTGAGCTCGAGGCTAAATGA 720 0.4083 MWKLATKSSRFLPLLLQLPKHDASLSQRFTTGFPFHSPFQETGGISPKQVATVITFVLGGPGSGKGTQCAKIVETFGYKHLSAGDLLRREMSSDSKYGSMILNTIKEGKIVPSEVTVKLILREMKSSDNRKFLIDGFPRSEENRIAFEQIIGAEPRFVLFFDCPEEEMVKRVLSRNEGRVDDNIDTMRNRLKVFEALNLPVIDYYAKKGKLYRINAVGTADEIFKQVRPVFEACELEAK 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01861 239 CDD ADK 56 223 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vian5g01861 239 ProSitePatterns Adenylate kinase signature. 132 143 IPR033690 -
Vian5g01861 239 Gene3D - 48 233 IPR027417 -
Vian5g01861 239 PANTHER NUCLEOTIDE KINASE 36 227 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vian5g01861 239 FunFam Adenylate kinase 1 46 234 - -
Vian5g01861 239 Hamap Adenylate kinase [adk]. 53 232 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vian5g01861 239 NCBIfam UMP-CMP kinase family 54 231 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Vian5g01861 239 Pfam Adenylate kinase 57 209 - -
Vian5g01861 239 Hamap UMP-CMP kinase [CMPK1]. 52 234 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Vian5g01861 239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 231 IPR027417 -
Vian5g01861 239 PRINTS Adenylate kinase signature 196 210 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vian5g01861 239 PRINTS Adenylate kinase signature 132 148 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vian5g01861 239 PRINTS Adenylate kinase signature 56 69 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vian5g01861 239 PRINTS Adenylate kinase signature 84 98 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vian5g01861 239 PRINTS Adenylate kinase signature 179 194 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01861 Vian-Chr5 40699898 40703001 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01861 K13800 - gmx:100777369 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01861 5 40699898 40703001 Vian5g01861 5 40699898 40703001 ECH