Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01843 ATGGTTCTGTCTCAGAAGCTTCACGAGGCTTTCAAAGGCACCGTCGAGAGGATCACTGGCCCGCGTACCGTTTCCGCCTTCAAAGAAAAGGGTGTTCTCAGTGTCTCCGAGTTTGTTACCGCCGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTGGGAATCGGGTGAGCCAGGGAAGAGGAAGCCATACTTGCCACCTGAGAAACAGATATTGATCACTAGAAACGTGCCTTGTCTTCGGAGGGCTGCATCTGTTGAAGAAGAATACGAAGCTTCCGGAGGGGAAGTTCTGCTTGATGGTGATGATGGCTGGCTAGCAACTCATGGGAAACCTAAAGAAAACAAATCTGATGAGGATGATAATTTACCTTCCATGGAAAGCCTAGAAATCAGCAAAAAGAGTTCTATTAAGCAAATTCCTTCTTACATGGGAGCTGAGGATGACGACGATATTCCGGATATGGCAGACTTTGATGATAATTCCAATGTTATTGAAAATGATCCTGCCACTCTTCAGTCCACGTATATAGTAGCTCATGAGCCTGATGACGATAATATTCTACGAACCCGAACTTATGATGTCAGCATCACGTATGATAAATATTATCAAACACCACGAGTATGGCTTACTGGGTATGATGAGGCAAGAATGCTTTTGCAACCAGAACTTGTCCTTGAAGATGTTAGTCAAGACCATGCTCGCAAAACGGTAACAATTGAAGACCATCCTCACTTGCCTGGGAAGCATGCATCTATTCATCCATGTCGACATGGAGCAGTGATGAAGAAAATCATTGATGTCTTGATGTCACGTGGTGTTGAGCCTGAAGTTGACAAGTACCTATTCTTATTCCTAAAATTTATGGCTTCTGTAATTCCAACAATTGAGTACGATTACACCATGGACTTTGATCTTGGTAGCTCCAGCAATTGA 939 0.443 MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVTAGDNLVAKCPTWSWESGEPGKRKPYLPPEKQILITRNVPCLRRAASVEEEYEASGGEVLLDGDDGWLATHGKPKENKSDEDDNLPSMESLEISKKSSIKQIPSYMGAEDDDDIPDMADFDDNSNVIENDPATLQSTYIVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDEARMLLQPELVLEDVSQDHARKTVTIEDHPHLPGKHASIHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01843 312 MobiDBLite consensus disorder prediction 107 128 - -
Vian5g01843 312 FunFam Autophagy-related protein 3 164 297 - -
Vian5g01843 312 MobiDBLite consensus disorder prediction 102 135 - -
Vian5g01843 312 Pfam Autophagocytosis associated protein, active-site domain 37 301 IPR007135 GO:0019787
Vian5g01843 312 Gene3D - 153 297 - -
Vian5g01843 312 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 5 306 IPR046962 GO:0019776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01843 K08343 - gmx:100814257 581.637