Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01840 ATGGATCCAGATCAGGGCTCTTCGAGAAGCAGGAAGGAGAATTCTGCGAGGCGAGAGCCTAAAGTCGAAAGAAAATCAAGCGTGGAAGTTGCATTTAGTCCTGGAATTTCATCAACCTCCCTCAGGTCATATGGCACGAGCAAAGCTATAGATAATGGCACAAACAGTGGCTCGCCGTCTACATATTTTTCTAAAGAGCAAATTCGTTCACGACGTTCTTCTGCTGCTACTGAGGATCAAAATGATACCAGCACGATAGATGTTACTGATAATACCATCAATGCATCAGCCAGGAAATTCAAAAGAGAGTACAAGGAACCATGGGATTATAACAACTCTTATTATCCCATTACTCTTCCACTAAGGAAGCCAAATTCTGGAAATCCAGAAATTCTTGATGAGGAAGAATTTGGAGAAGCTGCTACTAGTTCGGAGTATGATGAGAATACTGTTAACTCTGCTGCAGAACTCGAGCTCTTGGAGAAGAGCGAGCAACATAAGATGTTTTTATTTCAGCTTCCTAAAAATATGCCTTTTAACGAGGGGAAGGAGAAGGAGCAAATTCGTACAACAGGATCCGGAAAGGCGCGTGCTTTGGAAGAGTTGCCAAGCGGATATATGGGCAAAATGCAGGTCTACAAGAGTGGAGCAATCAAACTTAAACTTGGAGAAGCTCTGTTCGACCTGTCTCCGGGTACAAAATGTGGATTTGCTCAAGATATTGTAGCGGTGAACTTTGCACAGAAACATATCTGCAATCTTGGCGAGATTAGCAATAAGGTTGTTGTAGTTCCTGATCTTGATTCAATTGATCTGAGAAACACTGGAGGCAAAAATGACTAA 843 0.4235 MDPDQGSSRSRKENSARREPKVERKSSVEVAFSPGISSTSLRSYGTSKAIDNGTNSGSPSTYFSKEQIRSRRSSAATEDQNDTSTIDVTDNTINASARKFKREYKEPWDYNNSYYPITLPLRKPNSGNPEILDEEEFGEAATSSEYDENTVNSAAELELLEKSEQHKMFLFQLPKNMPFNEGKEKEQIRTTGSGKARALEELPSGYMGKMQVYKSGAIKLKLGEALFDLSPGTKCGFAQDIVAVNFAQKHICNLGEISNKVVVVPDLDSIDLRNTGGKND 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01840 280 MobiDBLite consensus disorder prediction 31 70 - -
Vian5g01840 280 Pfam RNA polymerase III RPC4 183 266 IPR007811 GO:0003677|GO:0005666|GO:0006383
Vian5g01840 280 MobiDBLite consensus disorder prediction 1 26 - -
Vian5g01840 280 PANTHER DNA-DIRECTED RNA POLYMERASE III 7 270 IPR007811 GO:0003677|GO:0005666|GO:0006383
Vian5g01840 280 MobiDBLite consensus disorder prediction 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01840 Vian-Chr5 40582153 40585332 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01840 K03026 - gmx:100817982 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01840 5 40582153 40585332 Vian5g01840 5 40582153 40585332 ECH