Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01838 ATGTCAAAGAATAAAGATGCTACCAATCTCTCACGCACCTTTAAATACCTATTAGCTACCCAGTTCTTGTCAAGAGGGATTCCATTTATATTCAATACATGGATTGTAAGGCATCTCACACAAGAGGACTATGCGCTGTACGCAGTGCAGTTTCATCTGCTAGTCACATGTATATTATTTCTTAGCCGGGAGGGCTTTCGTCGAGCATGCTTGCGAATGGACCTGAAATGTGATGGCAATTCAATGGGAGATGTTGTGAAGCTAATGAAAGTAGTGTGGATGAGTTTCCCACTTGGAATATTTATTACAATTGTAATATGCCTTTTTGTCTTCTGGTGGCAACAAATAAGTTATTGTAGTCCACATGGGCAAGCTATCTTGATCAATGGTTTTGCATGTATTTTGGAGCTCTTGGCTGAGCCTGCGTACATTCTCTCACAAAGCATGGTTTTACTTGAATTACGGCTGATGGTTGAGACTATAGCCACTCTGTTACGATGCTTGACAATGTATTTTCTAATCAGCAAGCAAACTGGAATTGAAAAATCAATCATATTTGGTTTGTCACAGTCTGCATATGGAGCCATCTTATTTCTTGGTTATTGGGGCTATCTTTTGCTTTTCCAAAAATTGAAGGTTTCATACCTCTTTCCATTCAGAAAAGGAAAACTGATTGATTTTGACCAGCAGCTGTCCAAGATGTGTTTACTGTTTACCTTTCAATCCTTTCGAAAATTGATCCTTCAGGAAGGAGAAAAGATAGTACTTGTATGGTTGGATACACCATATAATCAGGCAGTATACGGCGTGGTGGACAAATTGGGTAGCTTAGTGGTGAGACTTGTCTTTTTACCTTTTGAAGAAAGTTCGTATGCAACATTTGCAAGGTCTGCTTCAGGACAATATCCAGGAAAAAGCAAGAAATTGGGAAATGGCTTGACGGAATCCCTTAAGTTAGTTTTGTTGATTGGCCTTGTTTTTATGGCATTTGGTCCAAGTTATTCTTATTCACTCATTAGATTGCTTTATGGTGAAAAATGGAGTGATGGAGAAGCGTCAACTGCCCTCCGTTGTTATTGCTTTTATGTCATTGTTTTGGCCATGAATGGAACCTCTGAAGCCTTTATGCATGCAGTTGCAACCGAGAGCCAACTCAAGCAATCTAATGATTCACTACTTATATTCTCGTTGATATATATAATTTTGAATGTCCTGTTAATAAGGTTAGCTGGGGCTGTTGGCTTGATAATGGCAAATTCTCTCAGTATCCTTTCTACTTTACCGTTATTTATTTCATGTTATTTCACAATTTACCTTTGTTTTTCCCTTATGGAAAGTCATGCGGATACTCAAGCATTACAGCTATTATTTATAAGCGGCTAA 1383 0.3839 MSKNKDATNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYALYAVQFHLLVTCILFLSREGFRRACLRMDLKCDGNSMGDVVKLMKVVWMSFPLGIFITIVICLFVFWWQQISYCSPHGQAILINGFACILELLAEPAYILSQSMVLLELRLMVETIATLLRCLTMYFLISKQTGIEKSIIFGLSQSAYGAILFLGYWGYLLLFQKLKVSYLFPFRKGKLIDFDQQLSKMCLLFTFQSFRKLILQEGEKIVLVWLDTPYNQAVYGVVDKLGSLVVRLVFLPFEESSYATFARSASGQYPGKSKKLGNGLTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRCYCFYVIVLAMNGTSEAFMHAVATESQLKQSNDSLLIFSLIYIILNVLLIRLAGAVGLIMANSLSILSTLPLFISCYFTIYLCFSLMESHADTQALQLLFISG 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01838 460 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 1 426 IPR007594 GO:0006488|GO:0016020
Vian5g01838 460 Pfam Rft protein 13 423 IPR007594 GO:0006488|GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01838 K06316 - gmx:100817452 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01838 5 40559285 40566373 Vian5g01838 5 40559285 40566373 ECH