Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01824 ATGGGTGTTGTGGAGGGTCTCTTAGCTTTAGCTTTGGTTATGAATGCGGTTGTGGTGTGTAATGGAGGCTCAAGCAGCCTCTTCACTAGGAAAATCGAGAAGACTGTGGATATGCCGCTTGACAGTGATGTTTTTTCCGTTCCTCCTGGTTATAATGCTCCTCAGCAAGTTCATATAACGCAAGGTGACCTTGTGGGGAGGGGGATCATAGTGTCATGGGTGACGATGGATGAACCGGGGTCGAGTGCAGTGCGTTACTGGAGTGAGAACAGTGGGAAGAAGAAGATTGCAGAAGGAAAAATTGTTACTTATAGGTTCTTCAATTACTCATCTGGGTTTATTCATCACACCACCATCAGACATTTGGAGTACAACACCAAATACTACTACGAAGTTGGACTTGGGAACACAACACGGCAGTTTTGGTTTGTTACTCCACCTGAAATTGGACCTGATGTACCATACACATTTGGTCTTATAGGGGATCTCGGTCAGAGTTTTGATTCAAATGCGACTCTTTCTCACTATGAATTGAGTCCAAGAAAAGGAGAAACTGTACTGTTTGTTGGAGACCTCTCTTATGCTGATAACTACCCGAATCATGATAATGTGAGGTGGGATACTTGGGGAAGGTTTGCAGAAAGAAGTGTTGCATATCAACCATGGATTTGGACTGCAGGGAACCATGAACTTGATTTTGCTCCAGAAATTGGTGAAACCGTACCTTTCAAGCCTTTCAGCCACCGTTACCATGTTCCTTACAAAGCATCTCAGAGCACTTCACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATCGTCTTGTCCTCATATTCAGCATATGGCAAATATACGCCGCAATATAAATGGCTTGAACTGGAGCTACCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCATGCATTCACCTTGGTACAATAGCTACAATTATCACTACATGGAAGGAGAAACAATGAGAGTAATGTACGAAGCCTGGTTTGTGAAGTACAAGGTTGATGTCGTGTTTGCTGGTCATGTTCATGCCTACGAACGATCTGAACGTGTTTCTAACATTGCATACAACGTCGTAAATGGCATTTGCACTCCTGTAAAAGATCAATCAGCTCCTGTTTATATCACCATTGGTGATGGAGGAAACCTTGAAGGATTAGCAACCAACATGACAGAACCACAACCAGAGTATTCTGCATACCGAGAAGCCAGCTTTGGACATGCCATGTTTTCCATAAAGAACCGAACTCATGCTCACTACAGCTGGAACCGAAATCAAGATGGTCTCGCTGTGGAGGCTGATTCCGTTTGGTTTTTCAACCGATACTGGCACCCAGTTGATGATTCCACCGTTCATGTTTCACATTGA 1395 0.438 MGVVEGLLALALVMNAVVVCNGGSSSLFTRKIEKTVDMPLDSDVFSVPPGYNAPQQVHITQGDLVGRGIIVSWVTMDEPGSSAVRYWSENSGKKKIAEGKIVTYRFFNYSSGFIHHTTIRHLEYNTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNATLSHYELSPRKGETVLFVGDLSYADNYPNHDNVRWDTWGRFAERSVAYQPWIWTAGNHELDFAPEIGETVPFKPFSHRYHVPYKASQSTSPFWYSIKRASAHIIVLSSYSAYGKYTPQYKWLELELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNIAYNVVNGICTPVKDQSAPVYITIGDGGNLEGLATNMTEPQPEYSAYREASFGHAMFSIKNRTHAHYSWNRNQDGLAVEADSVWFFNRYWHPVDDSTVHVSH 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01824 464 Pfam Calcineurin-like phosphoesterase 156 354 IPR004843 GO:0016787
Vian5g01824 464 Pfam Purple acid Phosphatase, N-terminal domain 54 145 IPR015914 GO:0003993|GO:0046872
Vian5g01824 464 SUPERFAMILY Purple acid phosphatase, N-terminal domain 36 147 IPR008963 GO:0003993|GO:0046872
Vian5g01824 464 Gene3D - 53 149 - -
Vian5g01824 464 SUPERFAMILY Metallo-dependent phosphatases 151 458 IPR029052 -
Vian5g01824 464 Gene3D - 150 459 IPR029052 -
Vian5g01824 464 PANTHER ACID PHOSPHATASE RELATED 13 448 IPR039331 GO:0003993
Vian5g01824 464 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 150 458 - -
Vian5g01824 464 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 53 149 - -
Vian5g01824 464 Pfam Iron/zinc purple acid phosphatase-like protein C 380 439 IPR025733 -
Vian5g01824 464 CDD MPP_PAPs 151 449 IPR041792 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01824 Vian-Chr5 40431695 40434472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01824 41 437 Miscellaneous Gene Families AT1G13900 25.268 1.54e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01824 K22390 - gmx:100815854 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01824 5 40431695 40434472 Vian5g01824 5 40431695 40434472 ECH