Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01820 ATGGAGGTAGATTTGAATTCGCAGTGCAACTGGACCATTCCTTCCTCAGCCTCTATCAGCGACACCATCACTTTCCAATCCTCGTACTGTCTCCTCAGCGACGATCAACGAACTGATCCCACTCCTCTTCTTCTTCATTCTCCTTCGCCAGATTCTCCTCCCTGCGAGATCAAGATTATTTTTCCGGAGAAGCACGAGCTCAGACAAATCTACGTTCGGAGCACTGCTCGCGTCTACGAGATTTACTTTGCGCCCAACGCTCGCACTAACAATGACTATCTCTGCACTGTCCGATGCGGTCTTGCTGTTAGAGACGATCACGTTCTTCGTTCCCCCGCTGTCCAAAATATAGGTGGTGACGATAATGTTAAAACTGAAGATGATTGGGTTGAGGTCAAAGTTCCCGATTCTCCCAACATCGCTTCGGAAACAAAACCCTACCTCAATTCCATTAAAACATATCAGTCTCAGGATCTTTATGAGGCTACCGCAGAGATTGATGATGCAAATCCTTGCATATCTGTTACTATTCGGCTGCTCTCGCTTCAGAATAAAGGATGTGTTTATGTTGATGAGATTTATGTGTTTGCTGATCCTGTTGATTCAGCCGATTCAGAAAGCCAAGAAAAGCCTTATGAAAACTCATCCGGAAGTTCCCTCATGGCTATGTTTATCCCCACTTTAATGCAATTATCTAAGACAACAGGGCTCAACAATTTAAATGCTCTCAGAAAGGAAAAGTCCCTTGTTCAGGGGGATGATTTGGAAGCAACTCTCCCTAGTGATTCTATAATTAAAACCCAGGTGATAGGAAACACTAGCATAACTGATCCCCAAGAAGTGACGTTGAAGGAGGTAGAAGGAGGTTGGGTGGGTCCATCCCAGCCAGATGTCATCCCACAAAATGCTAAAATCGAGAGTAACCCTGTTGCAGTACCCTCACAAACTGCCAAAATGGACAGCACTTACACAGTTGTACCCTCAAAAATTGCTGAAATGCAGAACAACCATAGTTCTGTTCCCTTTGAATTTGCTAAAATGGAGTGCAACCGTAGTTCTGTCCCTTCACAAGTTGATATTCCTGAGAGCAAAGGTGGTTTTTCTTTGGGTTACAATGTTGAAAGGCTCCTGGAACAGCTTGTATCACGCATGGACAGGATAGAAGAAATCTGTTTGGGCTTTCAAGAGAAAATGGTAGTGCCCATGAGCAGCATGGAGGTGAGACTTCAAAGAGTTGAGCAGCAAGTGGACACATTGACTAAGAATTTGCAGAACTCGGCATTGCCATCACATTGTAAGATTTTCTCTCCTGATGCTTCTTGTATTGTATCAGATGCCAACACCAGTGATTGTCCTGATTTTCTGGTGACTAGGGAAAGTGAACCAGATGAGAATCATTTACACGCAGAGATACCACATGTCCCTCCTTCTCCTAATAGGTCTGATTCAGGAAATATTTCTCCATTGCTCCCAGGTCTTGTAGTTACGGCACCCGAGTTTCCTGATAGCGAGGATGAAGAAGATAATGCATCAGGGCAAGAAACAAGTTCTTTGAAAGATAAAGGAAAGCACACAATTGATGATGCCTTATCTTCTGCATTGGCTAATTTTTTGTCTTCTGTGTCGATGGACTCTCCAAAGTATACGAAAAGTCTAACTGTTAAAGCCCCTGAGTTTTTAAATGAAGATGATGATGACGACCATGGGAGCAGTAGTGAGATAGCGAAAAATGACTCGGTTTGTCTTGCAGAAAGTGAGGAATTTAGTCACATCCAAGTGTTGGCTTCATCTAATACTTTGGAAAATGGTGAGAAGATAAACCCAGATTCTAATTATAAACAATCTGAAAAGACTTCCCAGGAAGCTGTAGAAGATGGACAAGTTTACATTGCTAGAGGAGATCGAGAAGAGGTGCATGTGAAAACTAATAGTTTAACTGAACTCAATCCTGAAACAGGTTTTATTGACAACTCTGAAGAAGATGATAATGGAAAAATCAATGGTCATAAAAGTGATGGTTCGCTCGACAATCAGATTCCATATTGTTATAGCATCACCGAGGAAGGACGGACTGCAGGAACTGAAGATACTGTTGCAAAAGAGGTACCTAGAAAGGCCTCCCACGAGAATATCTTAGAGAACGTTCTTGGATTTTCAGTAGGTTCCTCTGTTGTAGATTTTGAAAACCCAATCTTGGACGTGAAATTTATTTCTCAGAGAAGTCCTGCCACTGATCGTTTCCTTGAAGAGCTTCTTCAAGTTGATACACAAGAAACCACCAGTTCAGTAGATCCCTCTGTCAAGGAAAGCAATGTTGATCTTTCCGTTGAGGAACAACTGAAAAGAAATGATGTCTCAATTGAGGAGCAGTCAAATTTGATTTCCAATGGATGA 2394 0.424 MEVDLNSQCNWTIPSSASISDTITFQSSYCLLSDDQRTDPTPLLLHSPSPDSPPCEIKIIFPEKHELRQIYVRSTARVYEIYFAPNARTNNDYLCTVRCGLAVRDDHVLRSPAVQNIGGDDNVKTEDDWVEVKVPDSPNIASETKPYLNSIKTYQSQDLYEATAEIDDANPCISVTIRLLSLQNKGCVYVDEIYVFADPVDSADSESQEKPYENSSGSSLMAMFIPTLMQLSKTTGLNNLNALRKEKSLVQGDDLEATLPSDSIIKTQVIGNTSITDPQEVTLKEVEGGWVGPSQPDVIPQNAKIESNPVAVPSQTAKMDSTYTVVPSKIAEMQNNHSSVPFEFAKMECNRSSVPSQVDIPESKGGFSLGYNVERLLEQLVSRMDRIEEICLGFQEKMVVPMSSMEVRLQRVEQQVDTLTKNLQNSALPSHCKIFSPDASCIVSDANTSDCPDFLVTRESEPDENHLHAEIPHVPPSPNRSDSGNISPLLPGLVVTAPEFPDSEDEEDNASGQETSSLKDKGKHTIDDALSSALANFLSSVSMDSPKYTKSLTVKAPEFLNEDDDDDHGSSSEIAKNDSVCLAESEEFSHIQVLASSNTLENGEKINPDSNYKQSEKTSQEAVEDGQVYIARGDREEVHVKTNSLTELNPETGFIDNSEEDDNGKINGHKSDGSLDNQIPYCYSITEEGRTAGTEDTVAKEVPRKASHENILENVLGFSVGSSVVDFENPILDVKFISQRSPATDRFLEELLQVDTQETTSSVDPSVKESNVDLSVEEQLKRNDVSIEEQSNLISNG 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01820 797 MobiDBLite consensus disorder prediction 460 521 - -
Vian5g01820 797 MobiDBLite consensus disorder prediction 595 617 - -
Vian5g01820 797 MobiDBLite consensus disorder prediction 648 673 - -
Vian5g01820 797 MobiDBLite consensus disorder prediction 756 773 - -
Vian5g01820 797 MobiDBLite consensus disorder prediction 595 623 - -
Vian5g01820 797 MobiDBLite consensus disorder prediction 559 578 - -
Vian5g01820 797 PANTHER 40S RIBOSOMAL PROTEIN S27 2 795 - -
Vian5g01820 797 MobiDBLite consensus disorder prediction 756 775 - -
Vian5g01820 797 Coils Coil 402 422 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01820 - - gmx:100810497 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01820 5 40406458 40409814 Vian5g01820 5 40406458 40409814 ECH