Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01819 ATGTTGTTGTGTATCAGTTTGACAGTTTTGTTTCTTTTGATGGACAGGTCATGGTTTGCCGAGAGGGGTGAAATGAAGAAGTTTGCAGGATGTTCCCTGGTCGTTTCATTTGCTCCCACAGGTTCCAATATCCTTAAAAACAATGGCAGATTCCCACTAGTTATATCTCGTAGGAATAAGTTCAGCTATAGGTTATTTTCTACTCGTGTTCTGAAAGCACAATTACATGATAAGCCTGGGGTGGTTTCCAGATACTATCTTCCTCCTTGGTTTAGTGTTGCTCCAATGATGGAATGGACGGACAATCACTATAGGACTCTAGCACGCCTCATATCAAAACATGCTTGGCTGTACACGGAGATGGTTGCAGCTGAAACAATTGTTCATCAAAAGGACAATCTGGACAGATTCTTGGCATATTCTCCAGACCAACACCCCATTGTGCTTCAAATTGGAGGGAGCAATATAGAAAATTTGGCTAAAGCAACTGAGCTTGCTAATGCTTATTGTTATGACGAGATCAACTTAAACTGTGGATGCCCTAGTCCAAAAGTTGCTGGGCATGGGTGTTTTGGAAAGTTTGTTGCTGAGGCCATGTCAGCAATTGCTGCCACCACGAATGTACCTGTCAGTGTCAAATGTCGAATTGGTGTGGATGATCATGATTCTTATAGTGAGCTTTGTGATTTCATATACCAGGTTTCTTCTTTCTCACCCACTAAGCATTTTATAATTCACTCAAGGAAGGCACTGCTCAATGGTATTAGCCCTGCTGAGAATAGAAGCATTCCTCCGCTAAAATATGAATACTTCTATGGCCTCCTACGTGACTTTCCTGACCTAACATTTACAATCAATGGCGGCATTACTAGTGTTGAAGAGGTCCTTGCGGCTCGAGAAGCTGGGGCTCATGGTGTTATGGTCGGACGTGCAGCGTACACCAATCCTTGGCATATTTTGGGGCACGTAGACTCTGCAATTTATGGTACACCAAGTCCTGATCTTACACGTCGTCAGCCTTTACTCAATCTTTTCCATTCAGAACCTGGGAATGGACTTTGGAAGCGCAAAGCTGATGCTGCTTTCAAAAATTGCACGACTGTCGAATCATTTTTTGAAGAAACCCTTGTCGCAATTCCCGACTCAGTATTGGATTCGCCTGTTGCCAAACTACCACCTGGCCGTAGAGATCTTTTTGCCAACATAGACAATTTATTGCCTCCGCCATACAAAACAAGAGAAGAAGAGGCAGTAGTCATTTGCGCTTAA 1269 0.4326 MLLCISLTVLFLLMDRSWFAERGEMKKFAGCSLVVSFAPTGSNILKNNGRFPLVISRRNKFSYRLFSTRVLKAQLHDKPGVVSRYYLPPWFSVAPMMEWTDNHYRTLARLISKHAWLYTEMVAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGSNIENLAKATELANAYCYDEINLNCGCPSPKVAGHGCFGKFVAEAMSAIAATTNVPVSVKCRIGVDDHDSYSELCDFIYQVSSFSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVEEVLAAREAGAHGVMVGRAAYTNPWHILGHVDSAIYGTPSPDLTRRQPLLNLFHSEPGNGLWKRKADAAFKNCTTVESFFEETLVAIPDSVLDSPVAKLPPGRRDLFANIDNLLPPPYKTREEEAVVICA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01819 422 Pfam Dihydrouridine synthase (Dus) 93 320 IPR035587 -
Vian5g01819 422 CDD DUS_like_FMN 91 317 IPR035587 -
Vian5g01819 422 SUPERFAMILY FMN-linked oxidoreductases 90 354 - -
Vian5g01819 422 Gene3D Aldolase class I 87 323 IPR013785 -
Vian5g01819 422 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 339 416 IPR004653 GO:0002943|GO:0017150
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01819 Vian-Chr5 40398908 40403695 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01819 K05539 - gmx:100779457 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01819 5 40398908 40403695 Vian5g01819 5 40398908 40403695 ECH