Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01818 ATGGGATTTGATAATGAGTGCATAGTGAACATTCAATCTCTTGCTGGAGAGTACTTCTGTCCTGTGTGTCGGCTGCTTGTATTTCCAAATGAGGCTTTGCAGTCACAATGTACTCATTTATACTGCAAGCCATGTTTGACATACGTTGTGAGCACCACAAAGGCTTGCCCATATGATGGTTACTTGGTCACTGAGGCAGATTCCAAGCCTCTGACAGAGTCAAATAAAACACTTGCTGAAACTATTGGAAAAATCACGGTTCACTGCCTTTACCATAGGAGTGGATGCACATGGCAGGGAACTTTGTCTGAGTGCACATCCCATTGTTCTGGATGTGCTTTTGGCAATTCCCCCGTAGTTTGCAATAGGTGTGGGATCCAAATAGTGCATCGCCAAGTACAAGAACATGCACAAAATTGCCCTGGTGTGCAAGGTCAGGCACAACAGGTGACCACTACCCAGGATCCTTCAACTACTAGTGTCGTTGCTTCTACCGATCAGAACCAGAATGCTGCTCCCGTTGCAGCAACTACTGCACAAGCTGCTGTTTCAACTACCACCACGCCTGGGCAGGTTTCTAATCAGCAACCCAATCTTACACCCCAAACACAAGCTTTAGTTCAAACTGCTGGGCAGCCAACGGCAGAGCAGTGGTATCAGCAGCAACAGTATCAACAATACTACCAACAATACCCTGGACAAGATCCATACCAACAGCAGTATCAACATTACTATCCCTATCAACAGTCCATGGTTCCACAGTACCAGCAGGCCTATAGTCAACCCCAACCTCAGTCACAATCACAGCCCCAGGCCCAGCTTCAGCCTCAGCCCCAGCCACAGGCCCAACACCAATCACAGCAGCCTCAACTCCAACAACAACCTCAGGCTCAATCTCAACCACTTTCACATATTCAGGCTCCGGTTGTCCCACCATCTCAGAATCAGATGCAAGTTCAGCAACAACCTCAGCAACTTCAACCTGCTGTGCAGCCACATGGACAGACGAGTCATGCTCCTGGTCATTCCCTCCCTCAATCTCAGACTCAGCCCTATCCATACCCACAAGTTCAGCTTCATTCTGTCCAACCTCAACCTCAACAGCCTATGCAAATTCCTCCATATCAGCAGCCTCTTCCTCAAATGCAACATTCACAACCTCAAATTCAGCAACCAATTCAGAAGTATCCTGTTCCTCAATCTCAAGTTCACGCACAGCTGCAACCTAATGCTCCAGTTCAACATCCCTCTCAGCTCCCAATGCCTCCTCCTCATCCTGTGACACCGAATGTCCAGCCTCAAGTGCAAAATGCAGCAACACCTTCAGTGACGGGACATCACTCTTATCCGCAACCTCTGCCTCACCCAAATATGCAACCAGGAGTTCCTCAACATCCTATGCACGGGCATCCTCAAAGTGGGCCCCAACCCCATGCTCAACACCCTGTTCAGATGCAAAATCAGTTTCCTCCACAAATTCCAACCATGCGTCCTAATCAATCTCATGCCATGTTTCCTAATCAGCAATCATCTGTTCAGGGCCAAACTACCCCTCCTTTGCAACAACAGCCTGTATATTCCCACAATCAACAACCCGGACAAATTAACCAACGTCCTACTCTGCAACCGGTTCAACAGATACCTCAACAGCAAGCATTTGCACAGCACCAAATGCCTATGCCATCACATTTACGGCCACCCGGTCCAGCACATTCATTTGCCAAACATGTGTATCCGCAGCCACAGGGTAATATTGCACCATCAAATAACATTCAGCAGAATCAATCTCAAAATGCTGGAGGAAGGCCTTTAGTGCCTAACCATGCAGGACATCTACAGCCATTTGCTCAATCTTCCAATACTATTCCAGTTAGACATGGGCAAAATGGTGCTGGCTACTTGCTTGAAAATCAGAAATTGTTGGCTGGTACCAATAATCAAGTACAGTTGCCTTCTGAGTTGCAGTCTAGGGCACCAGAAACAATTGAAAGACATGGTGATGTTGTTGAACAACAAATTGACTCTGCCACTGGTAAACTGGGTAAAAGTTTTAAAGATTTGGACTCGGTGTCTGGATCAACAAATGAATTGAAATCTGAAAAATTCGAAGCACATTTGAAACCAGCAGAGGTTGGGAACATCCTAAATAATGAAGATCCACACTCTATTAAGACTTCAGTCCCAAATGCCAATGCAGTAGAAAATGGTGATTCTGTGAATAAGAATCTTGGGATGGGGGCAGCTGCTGAAAGCACTTGGAAGCCTTCAGTTAGTACTAAATCTGGTGGTGCAATGCACGGGCTTCCAAATGACACTAATGAACATTCTGTCCAAGGCAATGAGTTTCAAGAAGGACATCCACCAAAGACAGAGACAAAACTACCTGAGTCAGAAACTGATAAATTACAAAATGATGACAATTCTGCAGCATCTAATACTCAAAGCAATGGTGGTTTTGCTCAGCTGTCTCACTCTGCCGCTTTCACAGACCAGAGTAAGCATCAACAACCAATGACTAATTATGGGCCTTCCGTCCAGCAGAGATCTTCTGCAATGTTAGGTTCGCAATTGCCACACCCAACAATTCCAAACCAGTCACTCTCTTCATTGCACTCTTCAGCCCTTGTCAGGAATCATGGATCTGCCCATGATCCCCACACAGGACAGCCCTTAGCAGAGAGTTTTCCACCAACCATGTTTAAGCAACCACAAGATTCTGACATTACCCCTGGAAGGAGCTTTCAACCTCAGTCTCTTGGACCTCCGCAACCATTTAACCAGGTCCATGAGCCTCCTTTCCGTGCCGGAACTTCCAATTTGTCTCGTCTTGGAGGGCCTCAATTTGGTGCACCACTTCCTGGAGATATGCATGGTCGAATGGCAGCAAACATACCGCCACATGGTCCTGAAGGTTTTGGTTTGCATGATGATAGGTTCAAACCTTTCCTTGTTTCAAATCAACAAAATATTGACAAAAGAGAGTATGATGACGATCTTAAGAAATTCTCTAGGCTGCCTTTGGATGCTGAATCAATTTCTAAATTTGGGAATTACCCACTAAGTGCACATGAATCTGGAAAGAGATCAGTTGGTATTCATGATGATGTTATTAAGAAATCAGGTTCTACGCTTCATCCTGGTTATCTTGGACCAGGTCCCGGATATGGGAGACATCATATGGATGGTATGACTCCTAGAAGTCCTGTTGGTGAATATGCTGAGATGTCTTCCCGGAGATTGGGGGCACACTCTGGCAGTCTTGTTGGTAAGTCGGGAATAGATGATTTTGATGGCAGAGTTTCTCGTCATTTTGGTGGTGAGTTCCGTGATAGTCGTTTTCCTCATTTGCCTAGCCATTTGCGTAGAGATGAATTTGATGGTTTTGGTAATTTCCGAATGGGTGAACATCCAAGGAGTGGTGATTTCATTGGTCAAGATGAGTTTGCTGGCCATTTTCGAAGGGGTGATCCTTTGGGTCCTCATAATTTTCCTAGACATTTGCAGCTTGGGGAGCCTGTTGGTTTTGGTGCCCATCCTGGTCATATGAGAGCAGTTGAACATGGCAGTTTTCGTAGTTTTGAATCTTTTGCTAAAGGCAACCGGTCAGGTCATCCACAACTTGGTGAGCCTGGGTTCAGGAGCAGCTTTTCTCTTCCTGGATTTCCTAATGATGCTGGATTTTTAACAGGAGATATCAGGTCGTTTGATAATTTGAGGAGAAGGAAGACTTCCATGGGGTGGTGCCGGATATGTAAAGTTGACTGTGAAACAGTAGAAGGTCTGGACTTGCATTCACAAACAAAGGAGCACCAGAAGATGGCTATGGATATGGTTAAGACAATCAAGCAAAATGCGAAGAAACAGAAGTTAATACCCAGTGAACAACCCACAGTTGATGACGGAAACAAGGCACACAATACTGGTTTTGAGGGTCGTGGAAATAAGCATTGA 3951 0.4563 MGFDNECIVNIQSLAGEYFCPVCRLLVFPNEALQSQCTHLYCKPCLTYVVSTTKACPYDGYLVTEADSKPLTESNKTLAETIGKITVHCLYHRSGCTWQGTLSECTSHCSGCAFGNSPVVCNRCGIQIVHRQVQEHAQNCPGVQGQAQQVTTTQDPSTTSVVASTDQNQNAAPVAATTAQAAVSTTTTPGQVSNQQPNLTPQTQALVQTAGQPTAEQWYQQQQYQQYYQQYPGQDPYQQQYQHYYPYQQSMVPQYQQAYSQPQPQSQSQPQAQLQPQPQPQAQHQSQQPQLQQQPQAQSQPLSHIQAPVVPPSQNQMQVQQQPQQLQPAVQPHGQTSHAPGHSLPQSQTQPYPYPQVQLHSVQPQPQQPMQIPPYQQPLPQMQHSQPQIQQPIQKYPVPQSQVHAQLQPNAPVQHPSQLPMPPPHPVTPNVQPQVQNAATPSVTGHHSYPQPLPHPNMQPGVPQHPMHGHPQSGPQPHAQHPVQMQNQFPPQIPTMRPNQSHAMFPNQQSSVQGQTTPPLQQQPVYSHNQQPGQINQRPTLQPVQQIPQQQAFAQHQMPMPSHLRPPGPAHSFAKHVYPQPQGNIAPSNNIQQNQSQNAGGRPLVPNHAGHLQPFAQSSNTIPVRHGQNGAGYLLENQKLLAGTNNQVQLPSELQSRAPETIERHGDVVEQQIDSATGKLGKSFKDLDSVSGSTNELKSEKFEAHLKPAEVGNILNNEDPHSIKTSVPNANAVENGDSVNKNLGMGAAAESTWKPSVSTKSGGAMHGLPNDTNEHSVQGNEFQEGHPPKTETKLPESETDKLQNDDNSAASNTQSNGGFAQLSHSAAFTDQSKHQQPMTNYGPSVQQRSSAMLGSQLPHPTIPNQSLSSLHSSALVRNHGSAHDPHTGQPLAESFPPTMFKQPQDSDITPGRSFQPQSLGPPQPFNQVHEPPFRAGTSNLSRLGGPQFGAPLPGDMHGRMAANIPPHGPEGFGLHDDRFKPFLVSNQQNIDKREYDDDLKKFSRLPLDAESISKFGNYPLSAHESGKRSVGIHDDVIKKSGSTLHPGYLGPGPGYGRHHMDGMTPRSPVGEYAEMSSRRLGAHSGSLVGKSGIDDFDGRVSRHFGGEFRDSRFPHLPSHLRRDEFDGFGNFRMGEHPRSGDFIGQDEFAGHFRRGDPLGPHNFPRHLQLGEPVGFGAHPGHMRAVEHGSFRSFESFAKGNRSGHPQLGEPGFRSSFSLPGFPNDAGFLTGDIRSFDNLRRRKTSMGWCRICKVDCETVEGLDLHSQTKEHQKMAMDMVKTIKQNAKKQKLIPSEQPTVDDGNKAHNTGFEGRGNKH 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01818 1316 MobiDBLite consensus disorder prediction 804 876 - -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 752 785 - -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 431 447 - -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 559 602 - -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 377 414 - -
Vian5g01818 1316 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1A-LIKE 1022 1315 - -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 786 803 - -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 582 602 - -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 899 924 - -
Vian5g01818 1316 CDD RING-HC 18 57 - -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 255 366 - -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 255 536 - -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 148 198 - -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 477 536 - -
Vian5g01818 1316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 119 IPR013083 -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 415 430 - -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 714 946 - -
Vian5g01818 1316 SUPERFAMILY RING/U-box 13 73 - -
Vian5g01818 1316 ProSiteProfiles Zinc finger RING-type profile. 20 59 IPR001841 -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 718 738 - -
Vian5g01818 1316 SUPERFAMILY TRAF domain-like 84 169 - -
Vian5g01818 1316 ProSitePatterns Zinc finger RING-type signature. 37 46 IPR017907 -
Vian5g01818 1316 MobiDBLite consensus disorder prediction 1285 1316 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01818 - - gsj:114380210 1904.8