Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01791 ATGAGAACGCTGTCTACCCAATTTCGTTCCATCAAACGCCCTAATCCAAACCCTAAATTATGCAAATCGTCCTCTCCGACAAAATCAGAACTAAAATTCAATGCCAAACCAAAATCAGAGTCAGAGTCATGGTGCGTTTATCTCATCCTCTCCACCAACCATCCAATCAAAACCTATGTTGGGATCACAAACAATTTCCCTCGCCGTTTGAAGCAGCACAATGGGGAACTTAACGGTGGTGCAAAGGCATCCCGTGCTGGAAGGCCTTGGATCTGTGCATGCATCATTTGCGGTTTTGCAGACCGAAGTGAAGCTAGTATATTTGAATCAAAATGGAAAGCTATCTCAAGGAAAGCTCCCCGCAAAAATCAAAATGAACATCTCTCTGAACAAAGTGAAGATCCATCATTACCTCTGCTGCAACACAGACAAGCAGCTTTGAAAAAAGTGAAAGGTTCACTCGACTGCACTCACTTAGAATTCGTTTGGCATTTGGATCCATTGTGA 507 0.432 MRTLSTQFRSIKRPNPNPKLCKSSSPTKSELKFNAKPKSESESWCVYLILSTNHPIKTYVGITNNFPRRLKQHNGELNGGAKASRAGRPWICACIICGFADRSEASIFESKWKAISRKAPRKNQNEHLSEQSEDPSLPLLQHRQAALKKVKGSLDCTHLEFVWHLDPL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01791 168 Pfam GIY-YIG catalytic domain 44 118 IPR000305 -
Vian5g01791 168 ProSiteProfiles GIY-YIG domain profile. 42 124 IPR000305 -
Vian5g01791 168 MobiDBLite consensus disorder prediction 1 33 - -
Vian5g01791 168 Gene3D - 38 149 IPR035901 -
Vian5g01791 168 MobiDBLite consensus disorder prediction 1 32 - -
Vian5g01791 168 SUPERFAMILY GIY-YIG endonuclease 43 119 IPR035901 -
Vian5g01791 168 PANTHER STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 27 160 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01791 K15078 - gmx:100805152 305.834