Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01790 ATGGAAATTCTCTCGTATAGATCTGGACCATGCTGTCAAGTGGTGAACTTGCAGAGGAAATCGGATGAAAAGTCTTCAAATTCACGTCATTCTAGGATTCCCATTTTCAGAGAGCGTGAAGTTTGTTATACCAATACCATTTCTAGAAGAGGGTCAGTGAGATTTCATGATAAAAAGGAGCAGCAAAGAGATTTGGTTGGGTCTCTGACTGTTCTTGAAGGGTTCAAAAGAATCAATTGCAAGGCCTACAGTGATAGATACGAGGGCTATGTGATTGACGGTGAAAAGGGTTTAACAGATATTTCAGAGATAGAAGAGTCTGCAACTAGGAATATTCTCATTCCAGGTTTGCCAGATGGGTCAAATGGTGAATGTGGTGCTCCAATAAGTAGTTGCTTTTGGGAATGGAGGCCTAAGCTCAATGTTCACTATGAAAAGGCAGGATGTGAGAACGTGGATTCTCCACCTGTTGTGTTTCTTCCTGGTTTTGGTGTTGGCTCTTTCCATTATGAAAAGCAACTGAGAGATTTGGGGCGTGATAATAGAGTATGGGCACTGGATTTTCTAGGCCAAGGATTGTCCTTGCCCTTTGAAGATCCTGCTCCTCGGTATAACAAGGAAGGAGATACTTCAAATGGAAATGCTTCTTCATGGGGTTTTGGAGATGAAACGGAACCGTGGGCCACTAATCTTGTATACTCCATTGATTTATGGCATGACCAAGTTCGATACTTCATAGAAGAGGTCATTGGAGAACCAGTGTACATTGTGGGAAACTCATTAGGAGGATATGTTGCATTGTATTTTGCGGCACGTAGCCCTCATTTAGTGAAAGGTGTCACACTTCTTAATGCAACACCCTTTTGGGGGTTTCTTCCTAATCCAATAAAGAATCCACGCCTAGCAAAAATATTTCCTTGGGCTGGAACATTTCCATTACCAGCAAGTGTAAGAAAACTGACAGAGTTGGTGTGGGAGAAAATCAGTGATCCTGCAAGTATTGCAGAGGTACTTAATCAGGTTTATGCAGACCATTCAACGAATGTAGATAGCTTAATTTCACACATTGTGGAAACCACACGGCATCCTGCAGCATCAGCAGCTTTTGCTTCAATTATGTGTGCTCCACAAGCAGAGTTATCTTTCAATGAATCATTATCTAGATGTCGGAGAATGAATATACCAATGTGCCTGATGTACGGAAGAGAAGATCCGTGGGTAAAGCCACTTTGGGGAGTCCAAGTTAAAAGCAAGGTGCCTGAAGCTGCATATTATCAAATGAGCCCTGCTGGTCACTGTCCTCATGATGAAGTGCCTGAGGTGATAAATTTCTTGCTACGTGGGTGGATCAGAAATGTAGAATCTCAAGGTTCTATCTCACTGCCACTGCTTGATGACTTAGTCTCTGTGAAAGAAGGTAATGTGTGGGAGTTAGAATTTCTGAGAGAAGGTTCAAGAAAATCAACCATGGTGAGATTCTTCGGCTCCAGAATCTCCCTTTTGGACAGAATACGATCTTACATCGACAACCCTCGCCCCAAGTTCAGAAATTCAGCAGCTAAATCTCAATGA 1572 0.4243 MEILSYRSGPCCQVVNLQRKSDEKSSNSRHSRIPIFREREVCYTNTISRRGSVRFHDKKEQQRDLVGSLTVLEGFKRINCKAYSDRYEGYVIDGEKGLTDISEIEESATRNILIPGLPDGSNGECGAPISSCFWEWRPKLNVHYEKAGCENVDSPPVVFLPGFGVGSFHYEKQLRDLGRDNRVWALDFLGQGLSLPFEDPAPRYNKEGDTSNGNASSWGFGDETEPWATNLVYSIDLWHDQVRYFIEEVIGEPVYIVGNSLGGYVALYFAARSPHLVKGVTLLNATPFWGFLPNPIKNPRLAKIFPWAGTFPLPASVRKLTELVWEKISDPASIAEVLNQVYADHSTNVDSLISHIVETTRHPAASAAFASIMCAPQAELSFNESLSRCRRMNIPMCLMYGREDPWVKPLWGVQVKSKVPEAAYYQMSPAGHCPHDEVPEVINFLLRGWIRNVESQGSISLPLLDDLVSVKEGNVWELEFLREGSRKSTMVRFFGSRISLLDRIRSYIDNPRPKFRNSAAKSQ 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01790 523 Pfam Alpha/beta hydrolase family 157 441 IPR000073 -
Vian5g01790 523 SUPERFAMILY alpha/beta-Hydrolases 128 452 IPR029058 -
Vian5g01790 523 MobiDBLite consensus disorder prediction 200 219 - -
Vian5g01790 523 PANTHER PHEOPHYTINASE, CHLOROPLASTIC 1 510 IPR044211 GO:0015996|GO:0080124
Vian5g01790 523 FunFam Pheophytinase, chloroplastic 125 453 - -
Vian5g01790 523 Gene3D alpha/beta hydrolase 124 453 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01790 Vian-Chr5 40144879 40147393 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01790 - - var:108339791 1075.08