Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01789 ATGGTTTTCACGGAGTCCTCTCTTCTCCTTCCGTCCGGTTCGAACAGCAGGAAGAGCAATGTTCCGGAAGACAAATGGGATTTGGCGTACATAGTGTATTTCTCCCTGGGATTCGGTTACCTTCTCCCATGGAACGCTTTCATCACAGCCGTTGATTACTTCTCCTATCTTTACCCTGACATCAGCGTTGACCGCGTCTTCGCCGTCGTTTACATGGTTATCGGCCTCGTCGGAATCTCCCTCATCATCCTCTACCGTTACAGCTCCAAAGCCTTTCTCAGAATCAACCTTGGTTTGGTCCTCTTCGTCGTTTCGCTCCTCATCGTTCCCCTAGTTGACGCCTTCTACGTCAGGGGTCGTGTCGGAGTCATCGGTGGATTCTACGCCGCCGCCTTCGCCATCGGCCTCTCCGGCGTCGCTGATGCCCTCGTGCAGGGTTCCATTGTTGGCTCCGCCGGCGAGCTGCCGGAGAGGTACATGCAAGCTGTCATAGCTGGCACAGGCGGTTCTGGGGTGCTTGCTTCTATCCTGAGGATAATCACAAAAGCTGTTTACCCACAAGATGCCTCTGGCCTACAAAAGAGTGCAAATCTATACTTCTCTGTATCAATTGTGATTGTGTTCATATGCATGGTTTTATATAACATGGTGCACAAACTTCCTATTATGAAGTATTATAATGAACTTAAGGTTGAGGCTGCTGCTGCAAATGGAGACAGTGGTCCCCCAACTGGAGTTGTCTGGAGGTCGACTTTATGGGATATTGTTGGAAGCATCAAGTGGTATGGATTTGGCATTGTGCTCATTTATGCTGTGACTCTGGCAATTTTTCCTGGTTACATTACTGAGGATGTGCACTCTGAAATCCTTAAGGATTGGTATCCAATTCTCCTAATTGCTGCCTATAATGTGTTTGATCTGGTTGGCAAGTCTCTGACTGCAGTTTATCTCCTACAGAATGCAAAAGTTGCAATAGGTAGTTGCATAGCAAGATTGCTGTTTTTCCCTCTCTTCTTAGGGTGCTTGCATGGTCCCCAATTCTTCCGGACTGAGATTCCCGTGACGATACTAACTTGCCTCTTAGGGCTTACTAATGGCTACCTAACCAGTGTATTGATGATTATGATTCCTAAAGCTGTAAAGTCGCAGCATGCAGAGACTGCAGGGATTGTGAGTGTATTATTCTTAGTTTTTGGTCTGGCTTCTGGGTCTGTTATAGCTTGGTTTTGGGTCATCTGA 1239 0.4738 MVFTESSLLLPSGSNSRKSNVPEDKWDLAYIVYFSLGFGYLLPWNAFITAVDYFSYLYPDISVDRVFAVVYMVIGLVGISLIILYRYSSKAFLRINLGLVLFVVSLLIVPLVDAFYVRGRVGVIGGFYAAAFAIGLSGVADALVQGSIVGSAGELPERYMQAVIAGTGGSGVLASILRIITKAVYPQDASGLQKSANLYFSVSIVIVFICMVLYNMVHKLPIMKYYNELKVEAAAANGDSGPPTGVVWRSTLWDIVGSIKWYGFGIVLIYAVTLAIFPGYITEDVHSEILKDWYPILLIAAYNVFDLVGKSLTAVYLLQNAKVAIGSCIARLLFFPLFLGCLHGPQFFRTEIPVTILTCLLGLTNGYLTSVLMIMIPKAVKSQHAETAGIVSVLFLVFGLASGSVIAWFWVI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01789 412 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 18 410 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vian5g01789 412 Pfam Nucleoside transporter 134 411 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vian5g01789 412 PIRSF ENT 9 412 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vian5g01789 412 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 388 412 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vian5g01789 412 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 132 152 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vian5g01789 412 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 298 319 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01789 Vian-Chr5 40141455 40143469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01789 5 412 Organic Solute Cotransporters AT1G70330 65.693 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01789 K15014 - gmx:100793043 694.501