Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01788 ATGGTGTTAAACAAGCTTGTGATGGAAGTGAAGAGTCTATTTGCACGAGAAACGAATATTTTGAAACAACTAGAGTTGGTAGATTGGATCCAAAAACTAGGCCTTGCCAACCATTTTCAGAAGGAAATCAATGGCTTTCTTGAATCTATACATGCCTATGTCAAAACCAGCCATGTTAATACCAGTGAAGAACAAGATTTGCACGTATCTGCATTATGCTTCAGGCTTCTCAGAAATCACGGATATGCAGTTTTGCCTGATATGTTAAGCAAGTTCTTAGATAAAAATGGTAAAGTGAAGAGGACAATCAGCTCACATGCTGGAGATGTTAAACATGTGTTGGAGCTTCTTGAGGCCTCACATTTAGGATTGGAGGGAGAAAAGATATTGGATAAGGCAAAAATCTGTGCCATAAGTTCTCTGAAGGATGCTTTTTCTCTCAGTTCCATCAACAAGGACCAACTATCTGATACTGTAGATGCTGAAAGAGTGGTCCACTCTCTGGAGCTTTCATCCCACTGGAGAGTACAGTGGTTTGAAGTCAAATGGCATGTCAAGCAATACAGCAAGGAGAAAAATATGAACCCTGTTTTACTTGAACTATCTAAATTAAATTTCAATATGATTCAGTCAACACTTCAGCTGGAGTTGAAGGAATTATCCAGGTGGTGGGAGAATCTTGGCATAAAAGAAGAATTGAGCTTTGCAAGGAACAGGTTGGTTGAAAGCTTCATGTGTGCAGCAGGAGTTGCTTTTGAACCAAAGCACAAATCCATTAGAAAATGGCTCACTAAAGTTATTGTTTTCGTACTGGTCATTGATGATGTTTATGATATACATGCCTCGTTTCAAGAGTTGAAGCCCTTCACAATGGCGTTTGAGAGATGGGACGACACAGAAGTTGTTGAAGAACTTCCAACGTACATGAAAACTTGCGTCCATGCACTGAAAGATGTCACAAATGAAATTGCTTATGAAATTGGTGGAGAAAATAACTTTCACTTGGTGTTACATTACCTAAAGAAAGCGTGGATAGAGTTTTGCAAAGCATTGTACGAGGAGGCAAAGTGGTACAACAAAGGATACATTCCGTCGTTGCAAAAATATTTAAGCAATGCATGGATTTCATCTTCTGGGCCTGTGATTTTACTGCATTCATATCTTGGTACAATGTATCAAGTAAATGATTCGATGGAACATTTTGTACAGACGTACGAGGATTTGGTGTACAATGTATCTCTTGTGATTAGACTTTGCAACGACCTTGGGACTACGGTGGTATATAATCAATCTTTGCTTGCTTAA 1305 0.3893 MVLNKLVMEVKSLFARETNILKQLELVDWIQKLGLANHFQKEINGFLESIHAYVKTSHVNTSEEQDLHVSALCFRLLRNHGYAVLPDMLSKFLDKNGKVKRTISSHAGDVKHVLELLEASHLGLEGEKILDKAKICAISSLKDAFSLSSINKDQLSDTVDAERVVHSLELSSHWRVQWFEVKWHVKQYSKEKNMNPVLLELSKLNFNMIQSTLQLELKELSRWWENLGIKEELSFARNRLVESFMCAAGVAFEPKHKSIRKWLTKVIVFVLVIDDVYDIHASFQELKPFTMAFERWDDTEVVEELPTYMKTCVHALKDVTNEIAYEIGGENNFHLVLHYLKKAWIEFCKALYEEAKWYNKGYIPSLQKYLSNAWISSSGPVILLHSYLGTMYQVNDSMEHFVQTYEDLVYNVSLVIRLCNDLGTTVVYNQSLLA 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01788 434 Pfam Terpene synthase, N-terminal domain 4 159 IPR001906 GO:0010333|GO:0016829
Vian5g01788 434 SFLD Isoprenoid Synthase Type I 194 425 - -
Vian5g01788 434 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 4 192 IPR008930 -
Vian5g01788 434 Gene3D - 18 194 IPR036965 GO:0010333|GO:0016829
Vian5g01788 434 SUPERFAMILY Terpenoid synthases 195 424 IPR008949 -
Vian5g01788 434 Gene3D Farnesyl Diphosphate Synthase 4 425 IPR008949 -
Vian5g01788 434 Pfam Terpene synthase family, metal binding domain 199 425 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vian5g01788 434 PANTHER OS04G0344100 PROTEIN-RELATED 16 423 - -
Vian5g01788 434 SFLD Terpene Cyclase Like 1 C Terminal Domain 194 425 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01788 Vian-Chr5 40136313 40138426 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01788 K14173 - gmx:100812119 641.343