Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01777 ATGATAAACAGACGAATTTTGAACGATTGCTCTGCTTCAAATCCCTTCCTCGAAGTGAATGTCGACTCAAATTCCACTCTATCGGATGACGAGTTTGTGAGAGTTACAGTCACAGGGGTTTCAAATCCTTCAGACGGTGATTGGGTTGCCATGATCTCACCTTCAAATTCTGATGTGAAATCTTGTGTGCTGAATGAGTTGTTCTATCTGCAAACTGGTGATACGGCCAAACTTCCTCTGTTATGCCACTACCCTGTCAAGGCACAGTACATGAAAAATGATCCAAACTACCTCAGTTGCAAAAACAAAGAATGCAAGAAATACCAAGATGGGAAATGCGTTATCTCAACGTGCAGTGGTTCAATACAATTTCATGTCATCAATATTAGAAGTGACATTGAGTTCGTGTTCTTCTCTGGTGGATTCCTGAAACCCTGCCTTGTAGGAAGGTCCACGCCCTTGAGTTTTGCTAATCCCAAGAGGCCACTCTATGGCCATCTATCAAGTATAGATTCAACCGGAGCATCAATGAGATTGACATGGGTTAGTGGAGACAAAGAGCCTCAGCAAATCCAATATGCAAATGGAAAATCAGTTACTTCAACAGTCACTACATTCTCACAAGCTGATATGTGTAGTTCAGCGCTGCCCAGTCCTGCTAAGGATTTCGGATGGCATGATCCGGGATACATCCATTCAGCACTTATGACAGGACTAAATCCTTCAAGCCCATTTTCCTACAAATATGGAAGTGACTCGGTTGGTTGGAGTGAAGAAATTCAGTTTTCAACTCCACCAGCTGGAGGATCGGATGAGGTCAGATTCATTGCATTTGGTGATATGGGCAAAACTCCTCTCGATGCTTCCAAAGAACACTACATTCAGCCCGGAGCTCTTTCAGTGATTAAAGCTATAGCCGAAGATGTAAATTCCAAAAAAGTAAATTCAGTGTTTCACATCGGAGACATAAGCTATGCGACAGGTTTTCTAGCAGAATGGGATTTCTTCCTTCACCTTATCAACCCAGTAGCTTCCAGGCTTTCTTATATGACAGCAATAGGGAATCATGAGAGGGATTACGTAGATTCTGGTTCAGTATATATTACTCCTGACTCTGGTGGGGAATGTGGAGTACCGTATGAAACATATTTCCCAATGCCAACTTCAGCAAAAGATAAGCCTTGGTACTCTATAGAACAAGGAAGTGTTCATTTCACAGTAATATCAACTGAGCATGATTGGTCAGAAAATTCTGAGCAGTATGCGTGGATGCAAAAGGACATGGCATCGGTTAATCGACAGAAAACTCCTTGGCTAATCTTCATGGGACATAGACCGATGTACAGTTCTCATCAGGGATTGTTATCCTCTGGAAACAAATTTAATGAAGCTGTGGAGCCATTGCTATTTCAAAATAAGGTTGACTTGGCACTTTTCGGCCATGTACATAATTATGAGAGAACTTGTTCCGTGTTTCAACAAAAATGTAAAGCCATGCCTACAAAAGATAAAAAGGGAATGGATACATATGATGGCCGAAATTACAGTGCTCCAGTGCAAGTTGTCATTGGCATGGCTGGCTTCACCTTGGACAACTTTTCAAGCAATGTTGAGAGCTGGAGCCTGAAAAGGATTTCCGAATTTGGTTATCTAAGAGCACATGCTACAAGAAAGGACTTAAGCCTAGAGGTTAGTTCTTACTCTCTTGTATTCTACTCTCGCTCGCTTACATAG 1734 0.4193 MINRRILNDCSASNPFLEVNVDSNSTLSDDEFVRVTVTGVSNPSDGDWVAMISPSNSDVKSCVLNELFYLQTGDTAKLPLLCHYPVKAQYMKNDPNYLSCKNKECKKYQDGKCVISTCSGSIQFHVINIRSDIEFVFFSGGFLKPCLVGRSTPLSFANPKRPLYGHLSSIDSTGASMRLTWVSGDKEPQQIQYANGKSVTSTVTTFSQADMCSSALPSPAKDFGWHDPGYIHSALMTGLNPSSPFSYKYGSDSVGWSEEIQFSTPPAGGSDEVRFIAFGDMGKTPLDASKEHYIQPGALSVIKAIAEDVNSKKVNSVFHIGDISYATGFLAEWDFFLHLINPVASRLSYMTAIGNHERDYVDSGSVYITPDSGGECGVPYETYFPMPTSAKDKPWYSIEQGSVHFTVISTEHDWSENSEQYAWMQKDMASVNRQKTPWLIFMGHRPMYSSHQGLLSSGNKFNEAVEPLLFQNKVDLALFGHVHNYERTCSVFQQKCKAMPTKDKKGMDTYDGRNYSAPVQVVIGMAGFTLDNFSSNVESWSLKRISEFGYLRAHATRKDLSLEVSSYSLVFYSRSLT 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01777 577 Gene3D - 162 268 - -
Vian5g01777 577 SUPERFAMILY Metallo-dependent phosphatases 273 563 IPR029052 -
Vian5g01777 577 Pfam Iron/zinc purple acid phosphatase-like protein C 517 564 IPR025733 -
Vian5g01777 577 Pfam Fn3-like domain from Purple Acid Phosphatase 26 158 IPR040974 -
Vian5g01777 577 Gene3D - 269 571 IPR029052 -
Vian5g01777 577 Pfam Purple acid Phosphatase, N-terminal domain 166 264 IPR015914 GO:0003993|GO:0046872
Vian5g01777 577 CDD MPP_PAPs 272 554 IPR041792 -
Vian5g01777 577 PANTHER PURPLE ACID PHOSPHATASE-RELATED 11 564 - -
Vian5g01777 577 SUPERFAMILY Purple acid phosphatase, N-terminal domain 151 266 IPR008963 GO:0003993|GO:0046872
Vian5g01777 577 Pfam Calcineurin-like phosphoesterase 274 485 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01777 Vian-Chr5 40028303 40036706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01777 31 562 Miscellaneous Gene Families AT2G03450 30.912 1.77e-67 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01777 K22390 - gmx:100802505 1046.19