Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01768 ATGATGCTAGATTTGGGTCCGTTCTCGAACGAGAACTTCGACCCCAAGAAATGGATCAACTCGGCCTGTCAGAGTCGACACCCTCAGGACTCTTTGGACAAACACCTTGTGGACATGGAGATGAAGCTGCAGATGGTGTCAGAGGAAATCGCCGCGTCGCTCGAGGAGCAGAGCTCCGCCGCTCTCCTCCGTGTCCCCCGCGCCACTCGGGACGTCATACGCCTCCGCGACGACGCCGTCTCTCTCCGTTCGGCTGTCTCCTCCATCCTCCAGAAGCTCAAGAAGGCAGAGGGATCGTCTGCTGAATCTATAGCAGCACTTGCTAAAGTCGACGTTGTCAAACAGAGGATGGAAGCTGCATATGACACGTTGCAGGATGCTGCGGGATTAACTCAATTGAGTTCGACTGTGGAGGATGTATTTGCCAGTGGAGATCTTCCTCGTGCTGCAGAAACTCTAGCTAACATGAGGCATTGCTTGTCAGCAGTTGGGGAGGTTGCTGAATTTGCCAACATAAGAAAGCAACTCGAAGTCTTGGAGGATAGGCTAGACACGATGGTGCAGCCTCGTATCACAGACGCGTTATCTAATCGCAAGGCCGATGTTGCTCAAGATTTACGGTCTATTCTCATTAGAATTGGAAGGTTTAAGTCTCTGGAATCACAATATATAAAGGTTCATCTGAAACCAATTAAGCAGCTTTGGGAAGATTTTGATTCTAGAGAACGAGGTAATAAGTCTGCTGTTGAGAAAAATGAGATGGAGAGGATATCCAGCAGTGGTGATTTTCATTCAGTTTCACCTGCAATACCATTCTCCACTTGGCTACCAAGCTTTTATGACGAGCTACTGCTTTACCTTGAACAAGAGTGGAAATGGTGCATGGTTGCTTTTCCTGAAGATTATAAAACTCTTGTACCGAGGCTACTAAGTGAGACTATGATGACTATAGGAACCAGCTTCCAATCTCGTATCAACATTGCCATTGGAGATGCTGTTCCAGAAACAAAAGCACTGGCTAAAGGTTTACTAGATACTTTAGCGTGCGATATGCATAAAGGCATTAAGATTCAAACAAAGCATCTTGAGGCCTTGATTGAATTGCACAACATGACTGGGACCTTTGCGAGGAATATTCAACACTTATTTTCTGTTTCTGATATCCGAGTTTTAAGGGATGTGCTGAAAGCTGTGTACTTGCCTTACGAATTGTTTAAACAGAGGTATGGACAAATGGAGCGCGCCATCCTTTCCTCTGAGATTGCCGGAGTAGACTTAAGAGGAGCTGTTATTCGAGGGGTGGGAGCCCAAGGAGTTGAACTCAGTGAAACAGTTCGTAGGATGGAGGAATCTATTCCTCAAATAATTATACTTCTTGAAGCAGCTGCAGAGAGATGCATCAACTTCACTGGAGGTTCTGAGGCAGATGAACTGATTCTTGCCCTTGATGACATAATGTTACAATACATTTCCTCTCTGCAAGAAACACTTAAGTCACTGCGAACTGTCTGTGGTGTGGATTATGGAAGTGATGGTACTTTTAAGAAGGACACAGAGAAGAAGGATGGAAACCAAAATTCTCGGAGAGTTGATTTGATCTCAAATGAGGAGGAATGGTCCATAGTCCAAGGGGCATTGCAAATCCTGACAGTTGCAGATACTTTGACAAGCAGATCTTCTGTATTTGAAGCATCTTTAAGAGCCACTCTTGCTAGATTGAGCACAACCCTATCTTTTTCTGCATTTGGTTCAGCTCTAGACCAAAACCAGACTATTAATAATAGTGTAGAAGGGGAACCATCTTATGGCGGAAGGGCTGCCTTGGATATGGCAACACTGCGGTTGGTTGATGTGCCTGAGAAGGCCAGGAGACTCTTTAACCTTTTGAATCAGTCTAAAGATCCCCGATTTCACGCCCTTCCCCTTGCATCTCAAAGAGTTGCAGCATTTGCAGACACGGTTAACGAACTTGTATATGATGTCCTCATATCCAAAGTGCGGCAACGCCTCAGTGATGTGTCCCGTATGTCAATTTGGTCATCAGTTGAGGAACAAGGAAACTTTCCTCTCCCTACGTTCAGTGCATATCCACAGTCCTATGTTACTAGTGTTGGTGAATATCTTCTTACTTTACCCCAACAACTGGAGCCACTTGCTGAGGGAATTAACAATGAAGTCAATGATGAAGCGCAGTTCTTTGCAACTGAATGGATGTTCAAGGTTGCAGAGGGTGCTACTGCACTTTACATCGAGCAGTTGCGTGGGATTCAACACATTTCAGATCGTGGAGCACAGCAGCTATCAGTTGATATTGAGTATCTCAGTAATGTGCTTTCTGCTCTATCAATGCCAATTCCTCCAGTTCTGGCTACATTCCAAAGTTGTCTTTCTTCTCCAAGAAACCAACTACAAGATCTTTTAAAGACAGATTCAGGAAACCATCTTGATATGCCAACAGCAAACCTTGTTTGTAAGATGCGACGAGTGAATTTGGACTCATGA 2502 0.4492 MMLDLGPFSNENFDPKKWINSACQSRHPQDSLDKHLVDMEMKLQMVSEEIAASLEEQSSAALLRVPRATRDVIRLRDDAVSLRSAVSSILQKLKKAEGSSAESIAALAKVDVVKQRMEAAYDTLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLEDRLDTMVQPRITDALSNRKADVAQDLRSILIRIGRFKSLESQYIKVHLKPIKQLWEDFDSRERGNKSAVEKNEMERISSSGDFHSVSPAIPFSTWLPSFYDELLLYLEQEWKWCMVAFPEDYKTLVPRLLSETMMTIGTSFQSRINIAIGDAVPETKALAKGLLDTLACDMHKGIKIQTKHLEALIELHNMTGTFARNIQHLFSVSDIRVLRDVLKAVYLPYELFKQRYGQMERAILSSEIAGVDLRGAVIRGVGAQGVELSETVRRMEESIPQIIILLEAAAERCINFTGGSEADELILALDDIMLQYISSLQETLKSLRTVCGVDYGSDGTFKKDTEKKDGNQNSRRVDLISNEEEWSIVQGALQILTVADTLTSRSSVFEASLRATLARLSTTLSFSAFGSALDQNQTINNSVEGEPSYGGRAALDMATLRLVDVPEKARRLFNLLNQSKDPRFHALPLASQRVAAFADTVNELVYDVLISKVRQRLSDVSRMSIWSSVEEQGNFPLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGINNEVNDEAQFFATEWMFKVAEGATALYIEQLRGIQHISDRGAQQLSVDIEYLSNVLSALSMPIPPVLATFQSCLSSPRNQLQDLLKTDSGNHLDMPTANLVCKMRRVNLDS 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01768 833 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 3 829 IPR019335 GO:0006886|GO:0017119
Vian5g01768 833 Pfam Golgi complex component 7 (COG7) 4 828 IPR019335 GO:0006886|GO:0017119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01768 K20294 - gmx:100794449 1483.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01768 5 39970079 39975257 Vian5g01768 5 39970079 39975257 ECH