Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01767 ATGGCGTCCTCTCTCATTGCAAAGCGCTTCTTCTCCTCTTCTCTCCTCTCCAAGTCTCTCATTCGTCCCGCCGCTTCAGCCTCTCGCTCTTTCAACACCAACGCCATGCGCAACTACGACGACCGGAACGACGACGTCGAACGTCGCTCAGAATTCTCTTCCCCTCGCACTGCGCGTCGTGACGATATCTTCTCAGACGTGCTGGATCCGTTTTTTCCAACTCGGAGTTTGAGCCAGGTTCTGAACATGATGGATCAGTTCATGGACAATCCGTTCCTCTCTGCGCCGCGCGGTATCGGAGCTGGAGCCGGAGCTCGTCGCGGATGGGACGCGAGAGAGACAGAAGATGCTCTGCTTCTCCGCGTGGACATGCCTGGGCTTGGCAAAGAAGACGTGAAGATCTCCGTGGAGCAGAACACTCTTACTATCAAAGGTGAAGGTGCCAAAGAAGGCGACGAGGAAGAGAGCGCTCGTCGCTATACCAGCAGGATTGACTTGCCGGATAAGGTTTACAAGGTAGATCATATCAAAGCTGAGATGAAGAATGGTGTGCTGAAGGTTGTTTTGCCTAAAATGAAGGAGGAGGAGAGGAGAGACGTGATCAATGTCAGTGTTGAATAA 621 0.5282 MASSLIAKRFFSSSLLSKSLIRPAASASRSFNTNAMRNYDDRNDDVERRSEFSSPRTARRDDIFSDVLDPFFPTRSLSQVLNMMDQFMDNPFLSAPRGIGAGAGARRGWDARETEDALLLRVDMPGLGKEDVKISVEQNTLTIKGEGAKEGDEEESARRYTSRIDLPDKVYKVDHIKAEMKNGVLKVVLPKMKEEERRDVINVSVE 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01767 206 MobiDBLite consensus disorder prediction 38 55 - -
Vian5g01767 206 MobiDBLite consensus disorder prediction 35 55 - -
Vian5g01767 206 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 100 206 IPR002068 -
Vian5g01767 206 SUPERFAMILY HSP20-like chaperones 77 198 IPR008978 -
Vian5g01767 206 Gene3D - 59 205 IPR008978 -
Vian5g01767 206 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 26 201 IPR044656 -
Vian5g01767 206 Pfam Hsp20/alpha crystallin family 111 205 IPR002068 -
Vian5g01767 206 FunFam 23.6 kDa heat shock protein mitochondrial 58 205 - -
Vian5g01767 206 CDD ACD_sHsps-like 110 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01767 Vian-Chr5 39965844 39966604 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01767 K13993 - gmx:547852 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01767 5 39965844 39966604 Vian5g01767 5 39965844 39966604 ECH