Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01762 ATGATGGCAAAGTCTTTGGTGGGCCCCAGACCCATTTTTTTCCGCCCATACAGTCACACCACTAATTCACTAATCACACCCCTCCACTTTTCCTTCTCCGTCCGCCACGTCACCTTTTCCGCCGCAGCCATGTCTACTCCCGCCGCCGCCGCCGCCACCACCATCCATCCCTCCTTCGAAATTCTCGGCGGCGCACAGCACCGTTTCCTCCCAGCCCTCCCTCACTTGTCTCGCCCGTACCGCCCTTTCCCCCTCCTCGCCGCGAACCGTCACCTTGAAACGATATTCGCCGCCTTCTTCCGTTCCGTCCCCGAGGCCAGGCTCCGCCGGGAGTGCCTCCGGACCCATGACGGCGGCGCTGTCGCCCTCGACTGGGTCGCCGGCGACGACCGCCGTTTGCCCCCTGAATCTCCCGTCTTAATCTTGCTGCCAGGTTTAACCGGAGGTAGTGAAGATGCGTATGTGAGACACATGTTAATTAGAGCTCGAAGCAATGGATGGCGTGTGGTGGTTTTCAACAGCCGCGGTTGTGGAGATAGCCCTGTTACTACTCCTCAGTTCTATTCGGCTTCGTTTTTGGGAGATATGCGTGAAGTTGTTTCTCATGTCACTGCTAGATACCCGAATGCTAATCTATATGGGGTTGGATGGTCTCTTGGAGCCAACATTCTTGTTCGTTACTTGGGTCAGGAGTCTCTCAATTGTCCTCTTTCTGGCGCTGTATCATTGTGTAATCCTTTCAATTTAGTTGTGGCGGATGAGGACTTCCGAAAGGGCTTTAACAATATTTATGACAAGGCCCTTTCGAAGGCCCTTTGCAAGATTTTCAAGAAACATGCTTCACTCTTTGAAGACATGGGTGGTGAATATAATATTCCAATGGCAGCCAATGCCAAGTCTGTTAGGGAATTTGATGATGGACTAACCCGTGTTTCTTTTGGATTCAAGTCGGTGGATGAATACTACTCTAATTCAAGCAGTTCAGATTCCATAAAACATGTCAAAACCCCTTTGCTTTGCATTCAGGCGGCTAATGATCCGATTGCTCCTAATAGGGGAATTCCTCGTGAAGATATCAAGGAAAATCCAAACTGCTTGTTAGTAGTGACACCCAAAGGTGGCCATCTAGGGTGGGTTGCTGGTGATGAAGCTCCACTGGGAGCCCCTTGGACTGATCCCTTGGTAATGGATTTTATTCAACATTTAGAGAGAGATGCAGCTACTGCTCCAGAAACTAATTGTAATCCAGGAAGTAAAGAGGCCTTGTACCATCTTGAAGTGTAA 1284 0.5031 MMAKSLVGPRPIFFRPYSHTTNSLITPLHFSFSVRHVTFSAAAMSTPAAAAATTIHPSFEILGGAQHRFLPALPHLSRPYRPFPLLAANRHLETIFAAFFRSVPEARLRRECLRTHDGGAVALDWVAGDDRRLPPESPVLILLPGLTGGSEDAYVRHMLIRARSNGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMREVVSHVTARYPNANLYGVGWSLGANILVRYLGQESLNCPLSGAVSLCNPFNLVVADEDFRKGFNNIYDKALSKALCKIFKKHASLFEDMGGEYNIPMAANAKSVREFDDGLTRVSFGFKSVDEYYSNSSSSDSIKHVKTPLLCIQAANDPIAPNRGIPREDIKENPNCLLVVTPKGGHLGWVAGDEAPLGAPWTDPLVMDFIQHLERDAATAPETNCNPGSKEALYHLEV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01762 427 FunFam Esterase/lipase/thioesterase family protein 114 386 - -
Vian5g01762 427 PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN 35 407 - -
Vian5g01762 427 Pfam alpha/beta hydrolase fold 138 376 IPR000073 -
Vian5g01762 427 SUPERFAMILY alpha/beta-Hydrolases 109 385 IPR029058 -
Vian5g01762 427 ProSitePatterns Uncharacterized protein family UPF0017 signature. 305 346 IPR000952 -
Vian5g01762 427 Gene3D alpha/beta hydrolase 114 399 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01762 Vian-Chr5 39910083 39912565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01762 109 403 Miscellaneous Gene Families AT2G03140 32.660 1.68e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01762 - - gmx:100809859 707.983