Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01759 ATGGCGTCGTATCAGTTTCTCACTCAATTTTCTTCAACGAAGGAGATGGCGGCAGTGGAACAGCATGAGAAGGAGAAGGAGAAACTGCAGAAGGGAATCGCTGAGTTCTACGACGAGTCCTCCACCATATGGGAGAACATTTGGGGCGACCACATGCACCATGGCTTCTACGACCCGGATTCTACCGTTTCGGTTTCGGATCATCGTGCTGCTCAGATCCGAATGATCGAAGAGTCGCTTCGTTTCGCCTCGCTTTCTGAGGAGGCTACCAAATGGCCGAAGAGAATAGTTGATGTTGGATGTGGCATAGGGGGCAGTTCCAGATACTTGGCCGAGAAATTTGGGGCAACCAGCATTGGCATCACTCTCAGTCCTGTTCAAGCTCAAAGAGCTAATGCTCTTGCTGCAGCTCAAGGATTGGCTCACAAGGTTTCTTTCCAGGTTGCAGACGCTCTGCAGCAACCATTCCCTGATGGACAGTTTGATCTGGTGTGGTCCATGGAGAGTGGAGAGCATATGCCTGACAAAACTAAGTTTGTTGGAGAGTTGGCTCGGGTAGCAGCACCAGGTGGCACCATAATAATAGTAACATGGTGCCACAGGGATCTTGGCCCTGACGAACAATCCCTAAAACCATGGGAGCAAGATCTGTTGAAGAAGATTTGTGATGCATTTTATCTTCCAGCCTGGTGCTCAGCTGCTGATTACATCAAATTGCTTAAATCACTGTCACTTCAGGATATCAAGTCAGCAGATTGGTCTCCCTTTGTTGCTCCATTTTGGCCAGCAGTGATACGTTCTGCGTTAACATGGAATGGCCTCACTTCACTTTTGCGCAGTGGAGTGAAAACCATTAAAGGAGCTTTGGCTATGCCATTGATGATAAAAGGATACAAGAAGGGTTTGATTAAGTTTGTGATCATTACATGTAGAAAGCCTGAATAA 945 0.4741 MASYQFLTQFSSTKEMAAVEQHEKEKEKLQKGIAEFYDESSTIWENIWGDHMHHGFYDPDSTVSVSDHRAAQIRMIEESLRFASLSEEATKWPKRIVDVGCGIGGSSRYLAEKFGATSIGITLSPVQAQRANALAAAQGLAHKVSFQVADALQQPFPDGQFDLVWSMESGEHMPDKTKFVGELARVAAPGGTIIIVTWCHRDLGPDEQSLKPWEQDLLKKICDAFYLPAWCSAADYIKLLKSLSLQDIKSADWSPFVAPFWPAVIRSALTWNGLTSLLRSGVKTIKGALAMPLMIKGYKKGLIKFVIITCRKPE 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01759 314 CDD AdoMet_MTases 95 198 - -
Vian5g01759 314 PANTHER METHYLTRANSFERASE 38 281 - -
Vian5g01759 314 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 313 IPR029063 -
Vian5g01759 314 Gene3D Vaccinia Virus protein VP39 38 312 IPR029063 -
Vian5g01759 314 Coils Coil 19 39 - -
Vian5g01759 314 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 14 314 IPR025774 GO:0008168|GO:0032259
Vian5g01759 314 Pfam Methyltransferase domain 97 195 IPR013216 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01759 Vian-Chr5 39888472 39892291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01759 94 200 Acyl Lipid Metabolism Gene Families AT1G73600 36.449 6.96e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01759 K05928 - gmx:100792443 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01759 5 39888472 39892291 Vian5g01759 5 39888472 39892291 ECH