Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01741 ATGTCTCTCTCTTTTCTTTCTGTCTACTCTTCACCTCATCTCTCCTCTTCTCTTTTCTTTCCTACGCCACACCTTTCTCTCCTTTGTCTCCCAAAATTCTCAAATGCCCCAGCTCCCCAATTTATTTTATGCTGCCGAAGGAACGCTTCTTTTTCCGCCCGATGTGGGCCTGGAGTCCCCGATGGTACTCAGTATGACAGTGTTATCGAAGAAGATGAGCAACCCATGAAGGCTAGTTGCGATGACGAAGAAGAAGAAGAAGGCCAAGAGACTCTTAGCTCCTTAGTTTTGCCCGAAAGATGGGATGTCTTGGGTCTCGGTCAAGCCATGGTGGACTTCTCTGGCATGGTCGATGATAATTTTCTGAAGAATTTGGGGTTAGAGAAGGGAACGCGGAAAGTGGTAAATCATGAGGAAAGAGGTAGAGTTTTACAGGCTATGGATGGGTGCAGCTATAAAGCTGCGGCAGGTGGATCTCTCTCTAATACCTTAGTTGCCCTTGCAAGGCTTGGAAGTCGCTCCCTCAAAGTTCCTGCTATAAGTGTGGCAATGACCGGTAGTGTAGGGAGTGATCTGTTGGGGGGTTTCTACAGGGAAAAATTGCGCCGAGCAAATGTGCAATTTCTTTCCGAGCCTATCAAGGATGGGACTACTGGAACAGTTATAGTTCTCACAACTCCAGATGCCCAGCGAACAATGCTTGCATATCAGGGCACATCTTCAACTGTTAACTATGATGCATCCTTGGCTAGTGCAGTTTCCAAGACCAACATACTTATTGTTGAAGGGTATTTATTTGAACTTCCTGATACTATTAAAACAATAACCAAAGCATGTGAAAAAGCTCGGAGGAACGGTGCCTTGGTTGCAATAACAGCTTCAGATGTTTCCTGCATTGAGAGACACTTTGATGATTTTTGGGAAATTATTGGGAACAGTGTTGATTTAGTCTTTGCAAATGGTGATGAGGCCAGAGCTCTTTGTAATTTTGAAGCAAAGGAAAGTGCTGCTTCAGCTGCAAGGTATCTGAGCCACTTTGTTCCTCTGGTATCCGTTACAGATGGTCCTAGAGGCTCTTACATAGGTGTAAAAGGGGAAGCTGTATATATCCCTCCTTCATCATGTGTTCCAGTGGATACTTGTGGTGCTGGTGATGCATATGCATCTGGTATTCTATATGGTCTTTTAAGAGGCGTATCAGATTTGAGAGGTATAGGCACATTAGCAGCTAATGTTGCTGCTACTGTTGTTGGACAACAGGGAACACGCCTTAGAATTTCAGATGCAGTCAAATTGGCTGAATCTTTCGAATTTCAACTCGATTCCTCTTCTGTTGGCACTGATCATATTTCCAGCGTCTAA 1362 0.4449 MSLSFLSVYSSPHLSSSLFFPTPHLSLLCLPKFSNAPAPQFILCCRRNASFSARCGPGVPDGTQYDSVIEEDEQPMKASCDDEEEEEGQETLSSLVLPERWDVLGLGQAMVDFSGMVDDNFLKNLGLEKGTRKVVNHEERGRVLQAMDGCSYKAAAGGSLSNTLVALARLGSRSLKVPAISVAMTGSVGSDLLGGFYREKLRRANVQFLSEPIKDGTTGTVIVLTTPDAQRTMLAYQGTSSTVNYDASLASAVSKTNILIVEGYLFELPDTIKTITKACEKARRNGALVAITASDVSCIERHFDDFWEIIGNSVDLVFANGDEARALCNFEAKESAASAARYLSHFVPLVSVTDGPRGSYIGVKGEAVYIPPSSCVPVDTCGAGDAYASGILYGLLRGVSDLRGIGTLAANVAATVVGQQGTRLRISDAVKLAESFEFQLDSSSVGTDHISSV 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01741 453 Gene3D - 110 236 - -
Vian5g01741 453 PANTHER SUGAR KINASE 98 434 - -
Vian5g01741 453 Pfam pfkB family carbohydrate kinase 152 424 IPR011611 -
Vian5g01741 453 CDD adenosine_kinase 100 425 - -
Vian5g01741 453 Gene3D - 104 421 IPR029056 -
Vian5g01741 453 MobiDBLite consensus disorder prediction 73 92 - -
Vian5g01741 453 FunFam Putative sugar kinase slr0537 104 428 - -
Vian5g01741 453 SUPERFAMILY Ribokinase-like 101 424 IPR029056 -
Vian5g01741 453 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 379 392 IPR002173 GO:0016301
Vian5g01741 453 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01741 Vian-Chr5 39724957 39728883 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01741 - - gmx:100816996 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01741 5 39724957 39728883 Vian5g01741 5 39724957 39728883 ECH