Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01737 ATGGCTTCAAAATCTAGACCCAATCTATCTGAAAATCCCAGCAAAGGATCAATGGGAACTACTAGAATCAATAAAGCTAGCAAAGTAGTGTCCAAATCAGAATCCGAGTCACAATCCCCCTTGCAAAATTCGCGACTTTCTGTGGAACGATCTCCACGATCTGTTAATTCAAAGCCAACGATTGAGCGCAAATCACCAAGACCTTCCGCCACCCCACCTGATAAACAACCCCCTAGAGCTGCAAAGGGTTCAGAGTTGTTGCAGAACCAATTGAATCTTGCTCAAGAAGACCTAAAGAAAGCAAAGGAGCTGCTCATTCAGGCTGAGAAGGAGAAGCTAAAAGCAATTGATGAGTTGAAAGAAGCACAGAGGGTGGCTGAAGAAGCAAATGACAAACTCAGGGAAGCATTGGTGGTTCAAAAACGCGCCGAGGAGAATTCTGAGATTGAGAGGTTCCGAGCTGTGGAATTGGAGCAGGCCGGTATTGAAACTGTGAAGAAGAAGGAAGAAGAATGGAAGAAGGAGATTGAAAGTGTAAGGAACCAACATGCTTTGGACATGGCTGCTCTTCTCTCCACCACGCAGGAGCTTCAGCGGGTTAAACAAGAACTTGCCATGACTTGTGATGCAAAGAACCAGGCATTGAATCATGCCGATGATGCAACTAAAATTGCCGAGATTCAGGCAGAGAAAGCAGAGTTTTTATCAGCTGAATTGTTGCGATTGAAGGCCTTACTAGATGCAAAACTGGAAACACAGGCTGGTGAAAATCAGGTTATATTGAAACTGAAAACCGAGATAGAGGCTCTCAATGAAGAACTTGAAAAAGCAAAGGGTTACGCTGATAAGTTGTCAGAGAAAGAAGGTTTTATTGAACACCTTAATGTGGAGCTTGAAGCTTCAAAAATGGCGGAGTCTTATTCCCGTAGCCTGCTAGAGGAGTGGCATAAGAAGGTTGAGGAACTGGAAATGAGAATTGAAGAAGCAAACAGACTGGAGAGATCTGCATCAGAGTCTTTGGAATCTGTAATGAAACAGCTAGAAGGAAGCAATGATTTGTTGCATGAAGCAGAATCTGAAGTTACAACTCTTAAAGAGAAGGTGGGGTTACTAGAAATGACAATTGGGAGACACAGAGCTGATGTTGAGGATTCAGAACGTCAACTTCGTACGGCCAAGGAAGAAAGTCTTGAGAAGTCAAAGGAAGTTGAGGCTCTGAAATCTGAAATTGAGAAGGTTAAGGAAGAGAAAGCTCAGGCTTTGAACGATGAAAAACTTGCTGCTTCTAGTGTACAGACCTTATTAGAAGAGAAAAACAAACTTATCAGTGAGTTGGAAAATTCTAGGGATGAAGAAGAAAAGAGTAAAAAGGCAATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCTACAGAAGCCAGAGAAGCCAAGGAAAATCTACTAAACATCCAAGCTGAACGTGAAAGCTATGAGGCTCAGATTGAAGATTTGAAGCTAGTATTAAAAGCCACTAATGAAAAATACGAGTCCCTGCTTGATGAGGCACGACATGAGATCGATGTTCTTGTATGTAGCATTGAAAATTCAAAGAGTGTCTTTGAGAACTCCAAGGTTGAGTGGGAGCAGAGAGAGCATCATCTAGTAAGCTGCATAAAGAAAAACGAAGAAGAGAAGGTATCTCTGGAAAAAGAAATAAAAAGATTGCTTTATTTGCTTAAAGAAACCGAGGAAGAAGCTAATATAAACAGGGAGGAAGAAGCCCAGTTGAAGGAAAATCTGAAGGAAGTTGAGGCTGAGGCAATTCAACTGCAGGAAGCTCTTAAGGAAGCAACAGCTGAGAACATGAAACTGAAGGAGAATTTATTGGATAAAGAGAATGAGTTGCAGAGTATGTTTGAAGAAAATGATGAACTTCGGATGAGGGAATCTGAATCAATGAAGAAGGTGGAGGAGTTATCTAAGTTGTTGGAAGAAGCTACAACCATAAACCACACTGAGGAAAACGGGGATCTTACAGACAGTGAGAAAGACTATGATTTGCTTCCTAAAGTAGTTGAATTTTCTGAAGGGAATGGCCATGTAAAAGAGGACATTTCAAAGGTAGAGCTCTCAGTGAATCAGGAGGAACTCAAACAAAACATACCAGAAGAAAGCATAGACAAAGCTGAAAATATTGCATCTCCCAAACCTGAGGAAGTAGTGAGTGAAAAAGTGAAGGAAGAAGATGAGACGAAAGAGAAGGAGGATTCAGTAGAAGGTGAATTTAAAATGTGGGAGAGCTGCAAGATAGAGAAAAAGGAGTTCTCTCCAGAGAGAGAAGCAGAGCCTGAATCATTTGAAGAGGAAGTTAACTCAAAGGTAGAAGAAGGTGGTGAGAGTTTTGATAAGATAAATGGAAATTCAGTGACAGAGAACATTGATGAAGGTGGAAGCCCACCACCAAAACAACAACAACAACAATCCAAGAAGAAGAAAAAGCCTTTACTTGGCAAGTTTGGAAGCCTGTTAAAGAAAAAGGGTGCTGCCAACCAGAAATAG 2538 0.4129 MASKSRPNLSENPSKGSMGTTRINKASKVVSKSESESQSPLQNSRLSVERSPRSVNSKPTIERKSPRPSATPPDKQPPRAAKGSELLQNQLNLAQEDLKKAKELLIQAEKEKLKAIDELKEAQRVAEEANDKLREALVVQKRAEENSEIERFRAVELEQAGIETVKKKEEEWKKEIESVRNQHALDMAALLSTTQELQRVKQELAMTCDAKNQALNHADDATKIAEIQAEKAEFLSAELLRLKALLDAKLETQAGENQVILKLKTEIEALNEELEKAKGYADKLSEKEGFIEHLNVELEASKMAESYSRSLLEEWHKKVEELEMRIEEANRLERSASESLESVMKQLEGSNDLLHEAESEVTTLKEKVGLLEMTIGRHRADVEDSERQLRTAKEESLEKSKEVEALKSEIEKVKEEKAQALNDEKLAASSVQTLLEEKNKLISELENSRDEEEKSKKAMESLASALHEVSTEAREAKENLLNIQAERESYEAQIEDLKLVLKATNEKYESLLDEARHEIDVLVCSIENSKSVFENSKVEWEQREHHLVSCIKKNEEEKVSLEKEIKRLLYLLKETEEEANINREEEAQLKENLKEVEAEAIQLQEALKEATAENMKLKENLLDKENELQSMFEENDELRMRESESMKKVEELSKLLEEATTINHTEENGDLTDSEKDYDLLPKVVEFSEGNGHVKEDISKVELSVNQEELKQNIPEESIDKAENIASPKPEEVVSEKVKEEDETKEKEDSVEGEFKMWESCKIEKKEFSPEREAEPESFEEEVNSKVEEGGESFDKINGNSVTENIDEGGSPPPKQQQQQSKKKKKPLLGKFGSLLKKKGAANQK 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01737 845 Coils Coil 162 182 - -
Vian5g01737 845 MobiDBLite consensus disorder prediction 713 793 - -
Vian5g01737 845 MobiDBLite consensus disorder prediction 1 64 - -
Vian5g01737 845 MobiDBLite consensus disorder prediction 712 845 - -
Vian5g01737 845 Coils Coil 428 518 - -
Vian5g01737 845 Coils Coil 84 146 - -
Vian5g01737 845 Coils Coil 551 641 - -
Vian5g01737 845 Coils Coil 312 423 - -
Vian5g01737 845 MobiDBLite consensus disorder prediction 796 818 - -
Vian5g01737 845 MobiDBLite consensus disorder prediction 380 400 - -
Vian5g01737 845 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 21 839 - -
Vian5g01737 845 MobiDBLite consensus disorder prediction 1 89 - -
Vian5g01737 845 Coils Coil 260 287 - -
Vian5g01737 845 Pfam Weak chloroplast movement under blue light 85 376 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01737 Vian-Chr5 39698032 39701269 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01737 - - gmx:100777446 1259.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01737 5 39698032 39701269 Vian5g01737 5 39698032 39701269 ECH