Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01734 ATGTTCGGAGAACTTCAACACGAGCTGGAACTGCACGCGCCGGCGAGTGAGGCATGGGATCTGTTCGGTACCCTTCGAATAGGGCAACTGGTCGCTGAAGAACTTCCGCAGCTTTTTCAAAGCGTGGAGCTAACAGAAGGCGATGGAGGAGTTGGCACCGTCCTCAAATTAACTTTCGCACCAGGTGTGGGTGGACCGAGCGGGTACAAGGAGAAGTTCACGAAGATTGATAATGAGAATCGCATAAAGGAAACAGAGGTGGTTGAAGGAGGGTACTTGGAATTAGGGTTCAGTCTATTTAGGGTTCGTTTTGAAGTGATAGAGAAAGGTGAAGAGTCAAGCATAATCAAATCTACCATTGAATATGAATTGAACGACGATAATGCTTCCAATGCCTCACTTGTCTCTATTCAGTCACTGGTCACCATTGCTGAACTTGCCAAGAGTTACCTCAACAAGAACAAGCCTTCCACTCAATGA 480 0.4688 MFGELQHELELHAPASEAWDLFGTLRIGQLVAEELPQLFQSVELTEGDGGVGTVLKLTFAPGVGGPSGYKEKFTKIDNENRIKETEVVEGGYLELGFSLFRVRFEVIEKGEESSIIKSTIEYELNDDNASNASLVSIQSLVTIAELAKSYLNKNKPSTQ 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01734 159 Pfam Pathogenesis-related protein Bet v 1 family 3 135 IPR000916 GO:0006952
Vian5g01734 159 SUPERFAMILY Bet v1-like 4 153 - -
Vian5g01734 159 SMART Bet_v_1_2 1 154 IPR000916 GO:0006952
Vian5g01734 159 FunFam S-norcoclaurine synthase 1 156 - -
Vian5g01734 159 PANTHER - 6 127 - -
Vian5g01734 159 CDD Bet_v1-like 3 128 - -
Vian5g01734 159 Gene3D - 1 156 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01734 Vian-Chr5 39677015 39677580 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01734 - - gmx:100305838 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01734 5 39677015 39677580 Vian5g01734 5 39677015 39677580 ECH