Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01714 ATGATGGATTGCGGCGTTGGATCCATCGTGTGGGTGCGTCGGAGGAACGGGTCGTGGTGGCCGGGTCAAATCCTTGGCCCCGACGACCTCTCCGCTTCTCACCTCACCTCACCCCGATCCGGAACCCCCGTCAAGCTCCTCGGCAGAGAAGACGCCAGCGTGGATTGGTACAATTTGGAGAAATCCAAGCGTGTTAAGGCATTTCGGTGTGGTGAGTTTGATGATTGTATTGAAAAGGCCGAATCTGCTCAGGGGGGACCGCTGAAGAAGAGAGAGAAGTATGCGCGCCGAGAAGACGCCATTCTTCATGCTCTTGAGCTTGAGAAACAGATTTTGAAGAAGCAAGGGAGATCAGGTGGTAGACCATCAAATACCTTTAAAAAGGGTGCAGTTGCATCGCCTCCGGAAACACTGGGAAATGACAATGAAAACCATGCAAGTTCTTTTATGTATTGTGAAAGTGAGTCTGCTGGAGGCTTCTTTCTTCCAGAGATGGCCAAGGATGGCAATCAGCTGCGCGGGGAAGTGGATTATTCTGAAACAACACCTCGGATGAGAGACTTGCAGGATTTTGGGCTCAGAATTGCCCCTGCAAAAAAGAAGTTTCCATCTTTTGTTGAACCTAACATTTACCAGAAACGTACGGTTGATGATGGTGCTCGGGCTCTTGCAACCGGTGGTATACGCGCTGGCAGTACTGTTCACATGAATGGGGCTGGGCAATTAGGAGCTTCACGAGCAAAGAGGAGCAGATGTGTGTATTTTCCGACCGAGTCCAGTGATTCTCTTGATTACAGAGAGACTCTACCCCGTGTTGAGATGTCACCTTCCCAACGCAGAAGGGAGTTTGCTTATCATGGTTCTATGGTTGGAGAGACTGAATATACTTTTATGGATGATGTTGAATCTGATTCTTCAGAAACAGCCTGTAGTGATTCTGATTCTGATTCTTCGGAGACAGAACCAGACTTGGATGAAGAGATGACAATATTTTCAGAAACTGGTCATGATGCTGAAGAACATGAAAGCACTAGCAGCGAGGAGCTTGATGAATTAGCAAATTCCAGTGACATGCCTCACCTTTATCCTCGTGACTCAATAACAAGTAATGAAGCTGTGTCTAAATGGCAACTAAAAGGGAAAAGGAATAATCGGAATCTAGTAAAGAGGTCTGTTGGTGCTTCTGATGGAAAATGTAATATGTATGGAGCAGGAGCAGATGTTGAAGGAAAGAGTAGTCATTTAAGGCACAATATAAATAGTCCAAGTTTGCACCGCTACAAATTTGATTTTGGTGATACCTTTGATGACGATGATCAAAACTTTGGACTGGAAGATGAATACCCTCTGTCTTCTAGATCTATATCAAGAAGTCAAAGTAAAATTCATCGTGGTGCAGCTTGGAATGATTTGGCCTATGATGATCATCTAGCTTCTAAAAGACATTGGGATGCTAAAGCATATTCTCCGTTGTACGATGACCGTAATCATTTTGGCGGTAGGGTCAGGCCGATGCTAGTTGATGTAGATTTGAAAGTTCAAGCAAGCTATCGTAAAGAGTGTGTGCCCTTCATTTCGCTCATGAGTAAATTAGATGGGAGGGCAATAGTAGGGCACCCAATCCAGGTTGAGGCTCTCAGGGATGGCTCATCTGATATTCTATTTCCTACAATTGATGACTTCAGTAATGATGTGACTGGTATTGAGGGAAGTAGTGTGCTTCCACCAGCATGGAGGACTGCAAGGAGAACTGCAAATTTTCGCATCCCGCGCCCCCATGCACCATCATCAAATGGTGCTGAAGGTGCGGCTGAGTTCCCCTTTTCAGATCAAGAACAAAGCTTTGAATATAAAAGTTTAAATGCTGGAAGTTCCAGCCACCAGGCTAGCCTTCAAAGGAGGAGTGGCCTTAAAAGTCATCGTTCTTCAGCAGAAAAAAGATCCTTAAAAAAGGTGCCTAAGAAATTGAGCTTGTCATCTTGCCAAAAAACTCGAACTCTGTCCTCATTATCTACTGAGCATAATTTTAGTAGAAAGCCATTACATGATAGCAGTAGTTATCAAACAGATAGATTGACTAAACCAGACATTTCTGGGTCCACTACAGTAGCTTGCATACCAGTCCAGTTAGTGTTTAGTAGATTACTCGAGAAGATTAATAGGCCTCCATTGAAAACACCTAGTAATGTGGCTTTGCTGAATACTGGTGTGGATAGAAATTCATAG 2226 0.4447 MMDCGVGSIVWVRRRNGSWWPGQILGPDDLSASHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEFDDCIEKAESAQGGPLKKREKYARREDAILHALELEKQILKKQGRSGGRPSNTFKKGAVASPPETLGNDNENHASSFMYCESESAGGFFLPEMAKDGNQLRGEVDYSETTPRMRDLQDFGLRIAPAKKKFPSFVEPNIYQKRTVDDGARALATGGIRAGSTVHMNGAGQLGASRAKRSRCVYFPTESSDSLDYRETLPRVEMSPSQRRREFAYHGSMVGETEYTFMDDVESDSSETACSDSDSDSSETEPDLDEEMTIFSETGHDAEEHESTSSEELDELANSSDMPHLYPRDSITSNEAVSKWQLKGKRNNRNLVKRSVGASDGKCNMYGAGADVEGKSSHLRHNINSPSLHRYKFDFGDTFDDDDQNFGLEDEYPLSSRSISRSQSKIHRGAAWNDLAYDDHLASKRHWDAKAYSPLYDDRNHFGGRVRPMLVDVDLKVQASYRKECVPFISLMSKLDGRAIVGHPIQVEALRDGSSDILFPTIDDFSNDVTGIEGSSVLPPAWRTARRTANFRIPRPHAPSSNGAEGAAEFPFSDQEQSFEYKSLNAGSSSHQASLQRRSGLKSHRSSAEKRSLKKVPKKLSLSSCQKTRTLSSLSTEHNFSRKPLHDSSSYQTDRLTKPDISGSTTVACIPVQLVFSRLLEKINRPPLKTPSNVALLNTGVDRNS 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01714 741 Gene3D - 2 116 - -
Vian5g01714 741 CDD PWWP 7 83 - -
Vian5g01714 741 MobiDBLite consensus disorder prediction 301 328 - -
Vian5g01714 741 PANTHER T17B22.17 PROTEIN-RELATED 2 729 IPR044679 -
Vian5g01714 741 MobiDBLite consensus disorder prediction 620 637 - -
Vian5g01714 741 MobiDBLite consensus disorder prediction 113 139 - -
Vian5g01714 741 SUPERFAMILY Tudor/PWWP/MBT 5 110 - -
Vian5g01714 741 MobiDBLite consensus disorder prediction 329 343 - -
Vian5g01714 741 MobiDBLite consensus disorder prediction 620 694 - -
Vian5g01714 741 MobiDBLite consensus disorder prediction 655 694 - -
Vian5g01714 741 MobiDBLite consensus disorder prediction 301 354 - -
Vian5g01714 741 ProSiteProfiles PWWP domain profile. 6 61 IPR000313 -
Vian5g01714 741 Pfam PWWP domain 7 87 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01714 Vian-Chr5 39544015 39546899 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01714 - - gmx:102667517 1183.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01714 5 39544015 39546899 Vian5g01714 5 39544015 39546899 ECH